Ni(Glu)

Crystal submitted by:
Crystal submitted on:
Data collected on:
Structure solved by:
Table 1 Crystal data and structure refinement for Ni(Glu)
Identification code Ni(Glu)
Empirical formula C5H11NNiO6
Formula weight 239.86
Temperature/K 100.0
Crystal system Orthorhombic
Space group P212121
a/Å, b/Å, c/Å 7.1385(14), 10.343(2), 11.135(2)
α/°, β/°, γ/° 90.00, 90.00, 90.00
Volume/Å3 822.2(3)
Z 4
ρcalcmg/mm3 1.938
m/mm‑1 2.359
F(000) 496
Crystal size/mm3 0.1 × 0.1 × 0.1
Theta range for data collection 2.69 to 27.92°
Index ranges -8 ≤ h ≤ 9, -13 ≤ k ≤ 13, -12 ≤ l ≤ 14
Reflections collected 4322
Independent reflections 1858[R(int) = 0.0364]
Data/restraints/parameters 1858/0/162
Goodness-of-fit on F2 0.785
Final R indexes [I>2σ (I)] R1 = 0.0257, wR2 = 0.0363
Final R indexes [all data] R1 = 0.0305, wR2 = 0.0368
Largest diff. peak/hole / e Å-3 0.483/-0.381

Table 2 Atomic Coordinates (Å×104) and Equivalent Isotropic Displacement Parameters (Å2×103) for Ni(Glu). Ueq is defined as 1/3 of of the trace of the orthogonalised UIJ tensor.
AtomxyzU(eq)
Ni18919.6(5)4344.1(3)390.9(3)9.11(8)
O110225(2)2599.9(16)229.3(17)9(4)
O5W7983(3)6179.3(18)307(2)17(5)
O314964(2)5351.1(17)-2921.7(15)10.9(4)
C513490(4)4773(2)-3286(2)11.8(7)
O26452(2)3740.1(15)1138.2(15)12.1(4)
O413188(2)4659.7(15)-4410(16)13.1(5)
N18205(4)3929(2)-1363(2)11.1(6)
C110408(4)2187(2)-832(2)9(6)
C29341(4)2849(2)-1846(2)9.9(7)
C412178(4)4239(3)-2345(2)12.7(6)
C310701(4)3323(3)-2821(3)11.4(7)
O6W4618(3)6493(2)-763(2)14(5)
Table 3 Anisotropic Displacement Parameters (Å2×103) for Ni(Glu). The Anisotropic displacement factor exponent takes the form: -2π2[h2a*2U11+...+2hka×b×U12]
AtomU11U22U33U23U13U12
Ni18.31(16)10.18(14)8.83(15)-0.08(17)0.05(17)-0.32(16)
O19.6(10)10.8(9)6.7(10)0.1(9)-1(9)3.2(7)
O5W10.2(11)12.1(10)28.8(13)-0.5(11)-6.6(12)-0.1(8)
O38.9(11)15.8(11)7.9(9)-0.3(8)-0.9(8)-3.7(8)
C511.9(18)9.5(13)14.1(16)1.2(11)1.5(12)4.1(11)
O211(11)11.9(9)13.3(10)-1.8(8)0.7(9)-1.5(8)
O411.5(10)16.1(10)11.8(11)0(8)0.6(8)-0.7(7)
N111.3(14)11.5(13)10.6(14)3.9(11)-0.3(11)3.7(10)
C17.1(14)5.3(13)14.5(15)0(11)0.5(12)-2.8(11)
C27.7(17)8.3(14)13.8(16)-2.9(12)-0.4(12)-2.5(11)
C411.1(15)16.1(16)11.1(14)0.4(14)-1.3(12)-3.3(14)
C310(18)16.3(15)7.9(14)2.4(13)-0.4(12)-0.6(12)
O6W14.5(12)14.5(11)13.1(13)0.6(10)1.2(10)-1.9(9)
Table 4 Bond Lengths for Ni(Glu).
AtomAtomLength/ÅAtomAtomLength/Å
Ni1O12.0386(17)C5O421.276(3)
Ni1O5W2.0147(19)C5C41.510(4)
Ni1O312.0651(17)O2C11.261(3)
Ni1O22.0460(18)O4Ni12.3181(16)
Ni1O412.3181(16)N1C231.482(3)
Ni1N12.064(2)C1O21.261(3)
O1C11.264(3)C1C21.524(4)
O3Ni12.0650(17)C2C31.537(3)
O3C51.276(3)C4C341.514(4)

12+X,1+Y,+Z; 22+X,1+Y,-1+Z; 3-1/2-X,-Y,1/2+Z; 41/2-X,-Y,1/2+Z

Table 5 Bond Angles for Ni(Glu).
AtomAtomAtomAngle/˚AtomAtomAtomAngle/˚
O1Ni1O392.23(7)O2Ni1O4149.74(7)
O1Ni1O299.17(7)O2Ni1N196.23(9)
O1Ni1O489.69(6)O2C1O1124.8(2)
O1Ni1N181.11(8)O2C1C2115.9(2)
O1C1C21119.3(2)O4C5O3119.6(2)
O5WNi1O1168.94(9)O4C5C41122.8(2)
O5WNi1O3191.52(8)N1Ni1O31171.18(9)
O5WNi1O291.19(8)N1Ni1O4113.77(8)
O5WNi1O483.18(8)N13C2C1110.1(2)
O5WNi1N194.01(10)N13C2C3111.2(2)
O3Ni1O4160.09(6)C1O1Ni1115.38(16)
O3C5C4117.5(2)C1O2Ni11129.13(17)
C5O3Ni1195.77(16)C1C2C31110.5(2)
C5O4Ni184.40(15)C2N1Ni1111.42(17)
C51C4C31114.7(2)C4C3C2113.1(2)
O2Ni1O3290.51(7)    

12+X,1+Y,+Z; 22+X,1+Y,-1+Z; 31/2-X,-Y,1/2+Z; 4-1/2-X,-Y,1/2+Z

Table 6 Hydrogen Bonds for Ni(Glu).
DHAd(D-H)/Åd(H-A)/Åd(D-A)/ÅD-H-A/°
O5WH5WAO6W0.79(3)1.92(3)2.701(3)173(3)
O5WH5WBO6W10.82(3)1.92(3)2.723(3)165(3)
O6WH6WAO420.70(3)2.09(3)2.776(3)167(3)
O6WH6WBO330.81(3)1.89(3)2.689(3)170(3)

11/2-X,1-Y,1/2+Z; 21+X,1+Y,+Z; 3-1/2+X,1/2-Y,-Z

Table 7 Torsion Angles for Ni(Glu).
ABCDAngle/˚
Ni1O1C1O21166.73(19)
Ni1O1C1C2-12.0(3)
Ni12O3C5O4-3.6(2)
Ni12O3C5C4175.9(2)
Ni1N1C2C111.7(3)
Ni1N1C2C3-111.2(2)
O1Ni1O2C13-46.5(2)
O1Ni1N1C2-13.81(17)
O1C1C2N1-0.1(3)
O1C1C2C3123.2(3)
O5WNi1O1C1-49.9(5)
O5WNi1O2C13129.6(2)
O5WNi1N1C2156.19(18)
O34Ni1O1C1-159.62(19)
O34Ni1O2C13-138.8(2)
O34Ni1N1C227.5(7)
O3C5O4Ni123.2(2)
O3C5C4C3-167.3(2)
C5C4C3C2-177.4(2)
O2Ni1O1C1109.50(19)
O2Ni1N1C2-112.16(18)
O21C1C2N1-178.9(2)
O21C1C2C3-55.7(3)
O44Ni1O1C1-99.57(19)
O44Ni1O2C13-151.91(18)
O44Ni1N1C271.89(19)
O4C5C4C312.2(4)
N1Ni1O1C114.56(19)
N1Ni1O2C1335.5(2)
N1C2C3C465.2(3)
C1C2C3C4-57.4(3)
C4C5O4Ni12-176.3(2)

11/2-X,-Y,1/2+Z; 22+X,1+Y,-1+Z; 3-1/2-X,-Y,1/2+Z; 42+X,1+Y,+Z

Table 8 Hydrogen Atom Coordinates (Å×104) and Isotropic Displacement Parameters (Å2×103) for Ni(Glu).
AtomxyzU(eq)
H3B11310(3)2490(2)-3217(18)3(6)
H3A9950(4)3710(3)-3410(2)17(8)
H5WA7010(4)6340(2)0(2)18(10)
H6WA4040(4)6140(2)-380(2)11(9)
H1B8090(3)4540(2)-1810(2)3(8)
H4A11660(3)5040(2)-1890(2)20(8)
H1A6890(4)3680(2)-1200(2)14(8)
H6WB4690(5)6070(3)-1370(3)50(14)
H5WB8640(5)6810(3)470(3)61(12)
H4B13000(4)3770(2)-1660(2)25(8)
H28580(3)2233(19)-2230(2)0(6)

[RSC Journal Format]

Experimental

Single crystals of C5H11NNiO6 [Ni(Glu)] were recrystallised from [solvents] mounted in inert oil and transferred to the cold gas stream of the diffractometer.

Crystal structure determination of [Ni(Glu)]

Crystal Data. C5H11NNiO6, =239.86, Orthorhombic, a = 7.1385(14) Å, b = 10.343(2) Å, c = 11.135(2) Å, = 822.2(3) Å3, T = 100.0, space group P212121 (no. 19), Z = 4, μ(Mo-Kα) = 2.359, 4322 reflections measured, 1858 unique (Rint = 0.0364) which were used in all calculations. The final wR(F2) was 0.0368 (all data).

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