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Savage, Abigail L, Iacoangeli, Alfredo, Schumann, Gerald G, Rubio-Roldan, Alejandro, Garcia-Perez, Jose L, Al Khleifat, Ahmad, Koks, Sulev ORCID: 0000-0001-6087-6643, Bubb, Vivien J ORCID: 0000-0003-2763-7004, Al-Chalabi, Ammar and Quinn, John P ORCID: 0000-0003-3551-7803 (2022) Characterisation of retrotransposon insertion polymorphisms in whole genome sequencing data from individuals with amyotrophic lateral sclerosis. GENE, 843. 146799-.

Balendra, Rubika, Jones, Ashley R, Al Khleifat, Ahmad, Chiwera, Theresa, Wicks, Paul, Young, Carolyn A ORCID: 0000-0001-6971-8203, Shaw, Pamela J, Turner, Martin R, Leigh, P Nigel and Al-Chalabi, Ammar (2023) Comparison Of King's Clinical Staging In Multinational Amyotrophic Lateral Sclerosis Cohorts. AMYOTROPHIC LATERAL SCLEROSIS AND FRONTOTEMPORAL DEGENERATION, 24 (1-2). pp. 71-81.

Fang, Ton, Al Khleifat, Ahmad, Stahl, Daniel R, Lazo La Torre, Claudia, Murphy, Caroline, Uk-Mnd LicalS, , Young, Carolyn ORCID: 0000-0001-6971-8203, Shaw, Pamela J, Leigh, P Nigel and Al-Chalabi, Ammar (2017) Comparison of the King's and MiToS staging systems for ALS. Amyotrophic lateral sclerosis & frontotemporal degeneration, 18 (3-4). pp. 227-232.

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Harvey, Calum, Weinreich, Marcel, Lee, James AK, Shaw, Allan C, Ferraiuolo, Laura, Mortiboys, Heather ORCID: 0000-0001-6439-0579, Zhang, Sai, Hop, Paul J, Zwamborn, Ramona AJ, van Eijk, Kristel et al (show 16 more authors) , Julian, Thomas H, Moll, Tobias, Iacoangeli, Alfredo, Al Khleifat, Ahmad, Quinn, John P ORCID: 0000-0003-3551-7803, Pfaff, Abigail L, Kõks, Sulev, Poulton, Joanna, Battle, Stephanie L, Arking, Dan E, Snyder, Michael P, Project MinE ALS Sequencing Consortium, , Veldink, Jan H, Kenna, Kevin P, Shaw, Pamela J and Cooper-Knock, Johnathan ORCID: 0000-0002-0873-8689 (2024) Rare and common genetic determinants of mitochondrial function determine severity but not risk of amyotrophic lateral sclerosis. Heliyon, 10 (3). e24975-.

Kabiljo, Renata, Bowles, Harry, Marriott, Heather, Jones, Ashley, Dobson, Richard JB, Quinn, John P ORCID: 0000-0003-3551-7803, Swanson, Chad M, Al Khleifat, Ahmad, Al Chalabi, Ammar and Iacoangeli, Alfredo (2022) RetroSnake: A Modular End-to-End Pipeline for Detection of Human Endogenous Retrovirus (HERV) Transposable Elements in Next Generation Sequencing (NGS) Data. iScience, 25 (11). 105289-.

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Kabiljo, Renata ORCID: 0000-0002-5183-4844, Bowles, Harry, Marriott, Heather, Jones, Ashley R, Bouton, Clement R ORCID: 0000-0001-9607-6533, Dobson, Richard JB, Quinn, John P ORCID: 0000-0003-3551-7803, Al Khleifat, Ahmad ORCID: 0000-0002-7406-9831, Swanson, Chad M, Al-Chalabi, Ammar et al (show 1 more authors) and Iacoangeli, Alfredo ORCID: 0000-0002-5280-5017 (2022) RetroSnake: A modular pipeline to detect human endogenous retroviruses in genome sequencing data. iScience, 25 (11). 105289-.

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Al Khleifat, Ahmad ORCID: 0000-0002-7406-9831, Iacoangeli, Alfredo, van Vugt, Joke JFA, Bowles, Harry, Moisse, Matthieu ORCID: 0000-0001-8880-9311, Zwamborn, Ramona AJ, van der Spek, Rick AA ORCID: 0000-0001-9983-204X, Shatunov, Aleksey ORCID: 0000-0002-2671-8040, Cooper-Knock, Johnathan ORCID: 0000-0002-0873-8689, Topp, Simon et al (show 37 more authors) , Byrne, Ross ORCID: 0000-0002-4082-6072, Gellera, Cinzia, López, Victoria ORCID: 0000-0001-8129-8352, Jones, Ashley R ORCID: 0000-0003-0470-0058, Opie-Martin, Sarah, Vural, Atay ORCID: 0000-0003-3222-874X, Campos, Yolanda, van Rheenen, Wouter ORCID: 0000-0002-5860-1533, Kenna, Brendan ORCID: 0000-0001-7591-2221, Van Eijk, Kristel R, Kenna, Kevin, Weber, Markus, Smith, Bradley, Fogh, Isabella, Silani, Vincenzo, Morrison, Karen E ORCID: 0000-0003-0216-5717, Dobson, Richard ORCID: 0000-0003-4224-9245, van Es, Michael A ORCID: 0000-0002-7709-5883, McLaughlin, Russell L ORCID: 0000-0003-3915-2135, Vourc'h, Patrick ORCID: 0000-0001-7960-8139, Chio, Adriano ORCID: 0000-0001-9579-5341, Corcia, Philippe, de Carvalho, Mamede ORCID: 0000-0001-7556-0158, Gotkine, Marc ORCID: 0000-0003-2541-6232, Panades, Monica P, Mora, Jesus S ORCID: 0000-0001-6633-5354, Shaw, Pamela J, Landers, John E ORCID: 0000-0001-8084-5043, Glass, Jonathan D ORCID: 0000-0002-3295-4971, Shaw, Christopher E, Basak, Nazli, Hardiman, Orla, Robberecht, Wim, Van Damme, Philip ORCID: 0000-0002-4010-2357, van den Berg, Leonard H, Veldink, Jan H ORCID: 0000-0001-5572-9657 and Al-Chalabi, Ammar ORCID: 0000-0002-4924-7712 (2022) Structural variation analysis of 6,500 whole genome sequences in amyotrophic lateral sclerosis. NPJ genomic medicine, 7 (1). 8-.

Bowles, Harry, Kabiljo, Renata, Al Khleifat, Ahmad, Jones, Ashley, Quinn, John P ORCID: 0000-0003-3551-7803, Dobson, Richard JB, Swanson, Chad M, Al-Chalabi, Ammar and Iacoangeli, Alfredo (2023) An assessment of bioinformatics tools for the detection of human endogenous retroviral insertions in short-read genome sequencing data. Frontiers in bioinformatics, 2. p. 1062328.