Development of hybrid coarse-grained atomistic models for rapid assessment of local structuring of polymeric semiconductors



Reisjalali, Maryam, Manurung, Rex, Carbone, Paola and Troisi, Alessandro ORCID: 0000-0002-5447-5648
(2022) Development of hybrid coarse-grained atomistic models for rapid assessment of local structuring of polymeric semiconductors. MOLECULAR SYSTEMS DESIGN & ENGINEERING, 7 (3). pp. 294-305.

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Abstract

Decades of work in the field of computational study of semiconducting polymers using atomistic models illustrate the challenges of generating equilibrated models for this class of materials. While adopting a coarse-grained model can be helpful, the process of developing a suitable model is particularly non-trivial and time-consuming for semiconducting polymers due to a large number of different interactions with some having an anisotropic nature. This work introduces a procedure for the rapid generation of a hybrid model for semiconducting polymers where atoms of secondary importance (those in the alkyl side chains) are transformed into coarse-grained beads to reduce the computational cost of generating an equilibrated structure. The parameters are determined from easy-to-equilibrate simulations of very short oligomers and the model is constructed to enable a very simple back-mapping procedure to reconstruct geometries with atomistic resolution. The model is illustrated for three related polymers containing DPP (diketopyrrolopyrrole) to evaluate the transferability of the potential across different families of polymers. The accuracy of the model, determined by comparison with the results of fully equilibrated simulations of the same material before and after back-mapping, is fully satisfactory for two out of the three cases considered. We noticed that accuracy can be determined very early in the workflow so that it is easy to assess when the deployment of this method is advantageous. The hybrid representation can be used to evaluate directly the electronic properties of structures sampled by the simulations.

Item Type: Article
Uncontrolled Keywords: Bioengineering
Divisions: Faculty of Science and Engineering > School of Physical Sciences
Depositing User: Symplectic Admin
Date Deposited: 14 Jan 2022 08:57
Last Modified: 15 Mar 2024 13:29
DOI: 10.1039/d1me00165e
Open Access URL: https://pubs.rsc.org/en/content/articlelanding/202...
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URI: https://livrepository.liverpool.ac.uk/id/eprint/3146299