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Lewis, Joseph M ORCID: 0000-0002-3837-5188, Mphasa, Madalitso, Banda, Rachel, Beale, Mathew A, Heinz, Eva, Mallewa, Jane, Jewell, Christopher, Faragher, Brian, Thomson, Nicholas R and Feasey, Nicholas A (2022) Colonization dynamics of extended-spectrum beta-lactamase-producing Enterobacterales in the gut of Malawian adults. NATURE MICROBIOLOGY, 7 (10). 1593-+.

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Volz, Erik ORCID: 0000-0001-6268-8937, Hill, Verity ORCID: 0000-0002-3509-8146, McCrone, John T ORCID: 0000-0002-9846-8917, Price, Anna ORCID: 0000-0002-0769-0417, Jorgensen, David ORCID: 0000-0003-4982-3764, O’Toole, Áine, Southgate, Joel ORCID: 0000-0003-3042-7761, Johnson, Robert ORCID: 0000-0002-7365-0042, Jackson, Ben, Nascimento, Fabricia F et al (show 571 more authors) , Rey, Sara M ORCID: 0000-0002-6196-022X, Nicholls, Samuel M ORCID: 0000-0003-4081-065X, Colquhoun, Rachel M ORCID: 0000-0002-5577-9897, da Silva Filipe, Ana ORCID: 0000-0002-9442-2903, Shepherd, James ORCID: 0000-0003-3915-048X, Pascall, David J ORCID: 0000-0002-7543-0860, Shah, Rajiv ORCID: 0000-0002-2827-5108, Jesudason, Natasha ORCID: 0000-0002-7313-6078, Li, Kathy ORCID: 0000-0001-5843-1653, Jarrett, Ruth ORCID: 0000-0003-0390-3478, Pacchiarini, Nicole ORCID: 0000-0001-5383-6053, Bull, Matthew ORCID: 0000-0002-8701-0417, Geidelberg, Lily, Siveroni, Igor, Goodfellow, Ian, Loman, Nicholas J, Pybus, Oliver G ORCID: 0000-0002-8797-2667, Robertson, David L ORCID: 0000-0001-6338-0221, Thomson, Emma C ORCID: 0000-0003-1482-0889, Rambaut, Andrew, Connor, Thomas R ORCID: 0000-0003-2394-6504, Koshy, Cherian, Wise, Emma, Cortes, Nick, Lynch, Jessica, Kidd, Stephen, Mori, Matilde, Fairley, Derek J, Curran, Tanya, McKenna, James P, Adams, Helen, Fraser, Christophe, Golubchik, Tanya, Bonsall, David, Moore, Catrin, Caddy, Sarah L, Khokhar, Fahad A, Wantoch, Michelle, Reynolds, Nicola, Warne, Ben, Maksimovic, Joshua, Spellman, Karla, McCluggage, Kathryn, John, Michaela, Beer, Robert, Afifi, Safiah, Morgan, Sian, Marchbank, Angela, Price, Anna, Kitchen, Christine, Gulliver, Huw, Merrick, Ian, Southgate, Joel, Guest, Martyn, Munn, Robert, Workman, Trudy, Connor, Thomas R, Fuller, William, Bresner, Catherine, Snell, Luke B, Charalampous, Themoula, Nebbia, Gaia, Batra, Rahul, Edgeworth, Jonathan, Robson, Samuel C, Beckett, Angela, Loveson, Katie F, Aanensen, David M, Underwood, Anthony P, Yeats, Corin A, Abudahab, Khalil, Taylor, Ben EW, Menegazzo, Mirko, Clark, Gemma, Smith, Wendy, Khakh, Manjinder, Fleming, Vicki M, Lister, Michelle M, Howson-Wells, Hannah C, Berry, Louise, Boswell, Tim, Joseph, Amelia, Willingham, Iona, Bird, Paul, Helmer, Thomas, Fallon, Karlie, Holmes, Christopher, Tang, Julian, Raviprakash, Veena, Campbell, Sharon, Sheriff, Nicola, Loose, Matthew W, Holmes, Nadine, Moore, Christopher, Carlile, Matthew, Wright, Victoria, Sang, Fei, Debebe, Johnny, Coll, Francesc, Signell, Adrian W, Betancor, Gilberto, Wilson, Harry D, Feltwell, Theresa, Houldcroft, Charlotte J, Eldirdiri, Sahar, Kenyon, Anita, Davis, Thomas, Pybus, Oliver, du Plessis, Louis, Zarebski, Alex, Raghwani, Jayna, Kraemer, Moritz, Francois, Sarah, Attwood, Stephen, Vasylyeva, Tetyana, Torok, M Estee, Hamilton, William L, Goodfellow, Ian G, Hall, Grant, Jahun, Aminu S, Chaudhry, Yasmin, Hosmillo, Myra, Pinckert, Malte L, Georgana, Iliana, Yakovleva, Anna, Meredith, Luke W, Moses, Samuel, Lowe, Hannah, Ryan, Felicity, Fisher, Chloe L, Awan, Ali R, Boyes, John, Breuer, Judith, Harris, Kathryn Ann, Brown, Julianne Rose, Shah, Divya, Atkinson, Laura, Lee, Jack CD, Alcolea-Medina, Adela, Moore, Nathan, Cortes, Nicholas, Williams, Rebecca, Chapman, Michael R, Levett, Lisa J, Heaney, Judith, Smith, Darren L, Bashton, Matthew, Young, Gregory R, Allan, John, Loh, Joshua, Randell, Paul A, Cox, Alison, Madona, Pinglawathee, Holmes, Alison, Bolt, Frances, Price, James, Mookerjee, Siddharth, Rowan, Aileen, Taylor, Graham P, Ragonnet-Cronin, Manon, Nascimento, Fabricia F, Jorgensen, David, Siveroni, Igor, Johnson, Rob, Boyd, Olivia, Geidelberg, Lily, Volz, Erik M, Brunker, Kirstyn, Smollett, Katherine L, Loman, Nicholas J, Quick, Joshua, McMurray, Claire, Stockton, Joanne, Nicholls, Sam, Rowe, Will, Poplawski, Radoslaw, Martinez-Nunez, Rocio T, Mason, Jenifer, Robinson, Trevor I, O'Toole, Elaine, Watts, Joanne, Breen, Cassie, Cowell, Angela, Ludden, Catherine, Sluga, Graciela, Machin, Nicholas W, Ahmad, Shazaad SY, George, Ryan P, Halstead, Fenella, Sivaprakasam, Venkat, Thomson, Emma C, Shepherd, James G, Asamaphan, Patawee, Niebel, Marc O, Li, Kathy K, Shah, Rajiv N, Jesudason, Natasha G, Parr, Yasmin A, Tong, Lily, Broos, Alice, Mair, Daniel, Nichols, Jenna, Carmichael, Stephen N, Nomikou, Kyriaki, Aranday-Cortes, Elihu, Johnson, Natasha, Starinskij, Igor, da Silva Filipe, Ana, Robertson, David L, Orton, Richard J, Hughes, Joseph, Vattipally, Sreenu, Singer, Joshua B, Hale, Antony D, Macfarlane-Smith, Louissa R, Harper, Katherine L, Taha, Yusri, Payne, Brendan AI, Burton-Fanning, Shirelle, Waugh, Sheila, Collins, Jennifer, Eltringham, Gary, Templeton, Kate E, McHugh, Martin P, Dewar, Rebecca, Wastenge, Elizabeth, Dervisevic, Samir, Stanley, Rachael, Prakash, Reenesh, Stuart, Claire, Elumogo, Ngozi, Sethi, Dheeraj K, Meader, Emma J, Coupland, Lindsay J, Potter, Will, Graham, Clive, Barton, Edward, Padgett, Debra, Scott, Garren, Swindells, Emma, Greenaway, Jane, Nelson, Andrew, Yew, Wen C, Resende Silva, Paola C, Andersson, Monique, Shaw, Robert, Peto, Timothy, Justice, Anita, Eyre, David, Crooke, Derrick, Hoosdally, Sarah, Sloan, Tim J, Duckworth, Nichola, Walsh, Sarah, Chauhan, Anoop J, Glaysher, Sharon, Bicknell, Kelly, Wyllie, Sarah, Butcher, Ethan, Elliott, Scott, Lloyd, Allyson, Impey, Robert, Levene, Nick, Monaghan, Lynn, Bradley, Declan T, Allara, Elias, Pearson, Clare, Muir, Peter, Vipond, Ian B, Hopes, Richard, Pymont, Hannah M, Hutchings, Stephanie, Curran, Martin D, Parmar, Surendra, Lackenby, Angie, Mbisa, Tamyo, Platt, Steven, Miah, Shahjahan, Bibby, David, Manso, Carmen, Hubb, Jonathan, Chand, Meera, Dabrera, Gavin, Ramsay, Mary, Bradshaw, Daniel, Thornton, Alicia, Myers, Richard, Schaefer, Ulf, Groves, Natalie, Gallagher, Eileen, Lee, David, Williams, David, Ellaby, Nicholas, Harrison, Ian, Hartman, Hassan, Manesis, Nikos, Patel, Vineet, Bishop, Chloe, Chalker, Vicki, Osman, Husam, Bosworth, Andrew, Robinson, Esther, Holden, Matthew TG, Shaaban, Sharif, Birchley, Alec, Adams, Alexander, Davies, Alisha, Gaskin, Amy, Plimmer, Amy, Gatica-Wilcox, Bree, McKerr, Caoimhe, Moore, Catherine, Williams, Chris, Heyburn, David, De Lacy, Elen, Hilvers, Ember, Downing, Fatima, Shankar, Giri, Jones, Hannah, Asad, Hibo, Coombes, Jason, Watkins, Joanne, Evans, Johnathan M, Fina, Laia, Gifford, Laura, Gilbert, Lauren, Graham, Lee, Perry, Malorie, Morgan, Mari, Bull, Matthew, Cronin, Michelle, Pacchiarini, Nicole, Craine, Noel, Jones, Rachel, Howe, Robin, Corden, Sally, Rey, Sara, Kumziene-Summerhayes, Sara, Taylor, Sarah, Cottrell, Simon, Jones, Sophie, Edwards, Sue, O’Grady, Justin, Page, Andrew J, Wain, John, Webber, Mark A, Mather, Alison E, Baker, David J, Rudder, Steven, Yasir, Muhammad, Thomson, Nicholas M, Aydin, Alp, Tedim, Ana P, Kay, Gemma L, Trotter, Alexander J, Gilroy, Rachel AJ, Alikhan, Nabil-Fareed, de Oliveira Martins, Leonardo, Le-Viet, Thanh, Meadows, Lizzie, Kolyva, Anastasia, Diaz, Maria, Bell, Andrew, Gutierrez, Ana Victoria, Charles, Ian G, Adriaenssens, Evelien M, Kingsley, Robert A, Casey, Anna, Simpson, David A, Molnar, Zoltan, Thompson, Thomas, Acheson, Erwan, Masoli, Jane AH, Knight, Bridget A, Hattersley, Andrew, Ellard, Sian, Auckland, Cressida, Mahungu, Tabitha W, Irish-Tavares, Dianne, Haque, Tanzina, Bourgeois, Yann, Scarlett, Garry P, Partridge, David G, Raza, Mohammad, Evans, Cariad, Johnson, Kate, Liggett, Steven, Baker, Paul, Essex, Sarah, Lyons, Ronan A, Caller, Laura G, Castellano, Sergi, Williams, Rachel J, Kristiansen, Mark, Roy, Sunando, Williams, Charlotte A, Dyal, Patricia L, Tutill, Helena J, Panchbhaya, Yasmin N, Forrest, Leysa M, Niola, Paola, Findlay, Jacqueline, Brooks, Tony T, Gavriil, Artemis, Mestek-Boukhibar, Lamia, Weeks, Sam, Pandey, Sarojini, Berry, Lisa, Jones, Katie, Richter, Alex, Beggs, Andrew, Smith, Colin P, Bucca, Giselda, Hesketh, Andrew R, Harrison, Ewan M, Peacock, Sharon J, Palmer, Sophie, Churcher, Carol M, Bellis, Katherine L, Girgis, Sophia T, Naydenova, Plamena, Blane, Beth, Sridhar, Sushmita, Ruis, Chris, Forrest, Sally, Cormie, Claire, Gill, Harmeet K, Dias, Joana, Higginson, Ellen E, Maes, Mailis, Young, Jamie, Kermack, Leanne M, Hadjirin, Nazreen F, Aggarwal, Dinesh, Griffith, Luke, Swingler, Tracey, Davidson, Rose K, Rambaut, Andrew, Williams, Thomas, Balcazar, Carlos E, Gallagher, Michael D, O'Toole, Áine, Rooke, Stefan, Jackson, Ben, Colquhoun, Rachel, Ashworth, Jordan, Hill, Verity, McCrone, JT, Scher, Emily, Yu, Xiaoyu, Williamson, Kathleen A, Stanton, Thomas D, Michell, Stephen L, Bewshea, Claire M, Temperton, Ben, Michelsen, Michelle L, Warwick-Dugdale, Joanna, Manley, Robin, Farbos, Audrey, Harrison, James W, Sambles, Christine M, Studholme, David J, Jeffries, Aaron R, Darby, Alistair C ORCID: 0000-0002-3786-6209, Hiscox, Julian A ORCID: 0000-0002-6582-0275, Paterson, Steve, Iturriza-Gomara, Miren ORCID: 0000-0001-5816-6423, Jackson, Kathryn A, Lucaci, Anita O, Vamos, Edith E, Hughes, Margaret, Rainbow, Lucille, Eccles, Richard, Nelson, Charlotte, Whitehead, Mark, Turtle, Lance, Haldenby, Sam T, Gregory, Richard, Gemmell, Matthew, Kwiatkowski, Dominic, de Silva, Thushan I, Smith, Nikki, Angyal, Adrienn, Lindsey, Benjamin B, Groves, Danielle C, Green, Luke R, Wang, Dennis, Freeman, Timothy M, Parker, Matthew D, Keeley, Alexander J, Parsons, Paul J, Tucker, Rachel M, Brown, Rebecca, Wyles, Matthew, Constantinidou, Chrystala, Unnikrishnan, Meera, Ott, Sascha, Cheng, Jeffrey KJ, Bridgewater, Hannah E, Frost, Lucy R, Taylor-Joyce, Grace, Stark, Richard, Baxter, Laura, Alam, Mohammad T, Brown, Paul E, McClure, Patrick C, Chappell, Joseph G, Tsoleridis, Theocharis, Ball, Jonathan, Grammatopoulos, Dimitris, Buck, David, Todd, John A, Green, Angie, Trebes, Amy, MacIntyre-Cockett, George, de Cesare, Mariateresa, Langford, Cordelia, Alderton, Alex, Amato, Roberto, Goncalves, Sonia, Jackson, David K, Johnston, Ian, Sillitoe, John, Palmer, Steve, Lawniczak, Mara, Berriman, Matt, Danesh, John, Livett, Rich, Shirley, Lesley, Farr, Ben, Quail, Mike, Thurston, Scott, Park, Naomi, Betteridge, Emma, Weldon, Danni, Goodwin, Scott, Nelson, Rachel, Beaver, Charlotte, Letchford, Laura, Jackson, David A, Foulser, Luke, McMinn, Liz, Prestwood, Liam, Kay, Sally, Kane, Leanne, Dorman, Matthew J, Martincorena, Inigo, Puethe, Christoph, Keatley, Jon-Paul, Tonkin-Hill, Gerry, Smith, Christen, Jamrozy, Dorota, Beale, Mathew A, Patel, Minal, Ariani, Cristina, Spencer-Chapman, Michael, Drury, Eleanor, Lo, Stephanie, Rajatileka, Shavanthi, Scott, Carol, James, Keith, Buddenborg, Sarah K, Berger, Duncan J, Patel, Gaurang, Garcia-Casado, Maria V, Dibling, Thomas, McGuigan, Samantha, Rogers, Hazel A, Hunter, Adam D, Souster, Emily and Neaverson, Alexandra S (2021) Evaluating the Effects of SARS-CoV-2 Spike Mutation D614G on Transmissibility and Pathogenicity. Cell, 184 (1). 64-75.e11.

Lewis, Joseph M ORCID: 0000-0002-3837-5188, Mphasa, Madalitso, Banda, Rachel, Beale, Mathew A, Mallewa, Jane, Heinz, Eva, Thomson, Nicholas R and Feasey, Nicholas A (2022) Genomic and antigenic diversity of colonizing Klebsiella pneumoniae isolates mirrors that of invasive isolates in Blantyre, Malawi. MICROBIAL GENOMICS, 8 (3).

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Hamilton, William L ORCID: 0000-0002-3330-353X, Tonkin-Hill, Gerry ORCID: 0000-0003-4397-2224, Smith, Emily R ORCID: 0000-0003-4925-467X, Aggarwal, Dinesh ORCID: 0000-0002-5938-8172, Houldcroft, Charlotte J ORCID: 0000-0002-1833-5285, Warne, Ben ORCID: 0000-0003-1326-0373, Meredith, Luke W, Hosmillo, Myra ORCID: 0000-0002-3514-7681, Jahun, Aminu S ORCID: 0000-0002-4585-1701, Curran, Martin D et al (show 28 more authors) , Parmar, Surendra, Caller, Laura G, Caddy, Sarah L ORCID: 0000-0002-9790-7420, Khokhar, Fahad A, Yakovleva, Anna, Hall, Grant ORCID: 0000-0003-3928-3979, Feltwell, Theresa, Pinckert, Malte L ORCID: 0000-0002-6072-5949, Georgana, Iliana ORCID: 0000-0002-8976-1177, Chaudhry, Yasmin, Brown, Colin S, Gonçalves, Sonia, Amato, Roberto, Harrison, Ewan M, Brown, Nicholas M ORCID: 0000-0002-6657-300X, Beale, Mathew A ORCID: 0000-0002-4740-3187, Spencer Chapman, Michael ORCID: 0000-0002-5320-8193, Jackson, David K ORCID: 0000-0002-8090-9462, Johnston, Ian, Alderton, Alex, Sillitoe, John, Langford, Cordelia, Dougan, Gordon, Peacock, Sharon J ORCID: 0000-0002-1718-2782, Kwiatowski, Dominic P, Goodfellow, Ian G ORCID: 0000-0002-9483-510X, Torok, M Estee ORCID: 0000-0001-9098-8590 and COVID-19 Genomics Consortium UK, (2021) Genomic epidemiology of COVID-19 in care homes in the east of England. eLife, 10. e64618-.