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Number of items: 25.


Kumar, Nitin, Browne, Hilary P, Viciani, Elisa, Forster, Samuel C, Clare, Simon, Harcourt, Katherine, Stares, Mark D, Dougan, Gordon, Fairley, Derek J, Roberts, Paul
et al (show 12 more authors) (2019) Adaptation of host transmission cycle during Clostridium difficile speciation. NATURE GENETICS, 51 (9). pp. 1315-1320.


Phillips, Maile T, Meiring, James E, Voysey, Merryn, Warren, Joshua L, Baker, Stephen, Basnyat, Buddha, Clemens, John D, Dolecek, Christiane, Dunstan, Sarah J, Dougan, Gordon
et al (show 7 more authors) (2021) A Bayesian approach for estimating typhoid fever incidence from large-scale facility-based passive surveillance data. STATISTICS IN MEDICINE, 40 (26). pp. 5853-5870.


Crosnier, Cecile, Iqbal, Zamin, Knuepfer, Ellen, Maciuca, Sorina, Perrin, Abigail J, Kamuyu, Gathoni, Goulding, David, Bustamante, Leyla Y, Miles, Alistair, Moore, Shona C ORCID: 0000-0001-8610-2806
et al (show 6 more authors) (2016) Binding of <i>Plasmodium falciparum</i> Merozoite Surface Proteins DBLMSP and DBLMSP2 to Human Immunoglobulin M Is Conserved among Broadly Diverged Sequence Variants. JOURNAL OF BIOLOGICAL CHEMISTRY, 291 (27). pp. 14285-14299.


Meiring, James E, Shakya, Mila, Khanam, Farhana, Voysey, Merryn, Phillips, Maile T, Tonks, Susan, Thindwa, Deus, Darton, Thomas C, Dongol, Sabina, Karkey, Abilasha
et al (show 13 more authors) (2021) Burden of enteric fever at three urban sites in Africa and Asia: a multicentre population-based study. LANCET GLOBAL HEALTH, 9 (12). E1688-E1696.


Napolitani, Giorgio, Kurupati, Prathiba, Teng, Karen Wei Weng, Gibani, Malick M, Rei, Margarida, Aulicino, Anna, Preciado-Llanes, Lorena, Wong, Michael Thomas, Becht, Etienne, Howson, Lauren
et al (show 20 more authors) (2018) Clonal analysis of Salmonella-specific effector T cells reveals serovar-specific and cross-reactive T cell responses. Nature Immunology, 19 (7). pp. 742-754.


Fachrul, Muhamad, Karkey, Abhilasha M, Shakya, Mila, Judd, Louise, Harshegyi, Taylor, Sim, Kar Seng, Tonks, Susan, Dongol, Sabina, Shrestha, Rajendra, Salim, Agus
et al (show 38 more authors) (2023) Direct inference and control of genetic population structure from RNA sequencing data. COMMUNICATIONS BIOLOGY, 6 (1). 804-.


Feasey, Nicholas A, Cain, Amy K, Msefula, Chisomo L, Pickard, Derek, Alaerts, Maaike, Aslett, Martin, Everett, Dean, Allain, Theresa J, Dougan, Gordon, Gordon, Melita ORCID: 0000-0002-0629-0884
et al (show 2 more authors) (2014) Drug resistance in Salmonella enterica ser. Typhimurium bloodstream infection, Malawi. Emerging Infectious Diseases, 20 (11). pp. 1957-1959.


Brevini, Teresa, Maes, Mailis, Webb, Gwilym J, John, Binu V, Fuchs, Claudia D, Buescher, Gustav, Wang, Lu, Griffiths, Chelsea, Brown, Marnie L, Scott, William EIII
et al (show 69 more authors) (2023) FXR inhibition may protect from SARS-CoV-2 infection by reducing ACE2. NATURE, 615 (7950). 134-+.


Kumar, Nitin, Miyajima, Fabio, He, Miao, Roberts, Paul, Swale, Andrew, Ellison, Louise, Pickard, Derek, Smith, Godfrey, Molyneux, Rebecca, Dougan, Gordon
et al (show 5 more authors) (2016) Genome-Based Infection Tracking Reveals Dynamics of Clostridium difficile Transmission and Disease Recurrence. Clinical Infectious Diseases, 62 (6). pp. 746-752.


Hamilton, William L ORCID: 0000-0002-3330-353X, Tonkin-Hill, Gerry ORCID: 0000-0003-4397-2224, Smith, Emily R ORCID: 0000-0003-4925-467X, Aggarwal, Dinesh ORCID: 0000-0002-5938-8172, Houldcroft, Charlotte J ORCID: 0000-0002-1833-5285, Warne, Ben ORCID: 0000-0003-1326-0373, Meredith, Luke W, Hosmillo, Myra ORCID: 0000-0002-3514-7681, Jahun, Aminu S ORCID: 0000-0002-4585-1701, Curran, Martin D
et al (show 28 more authors) (2021) Genomic epidemiology of COVID-19 in care homes in the east of England. eLife, 10. e64618-.


Aggarwal, Dinesh, Warne, Ben, Jahun, Aminu S, Hamilton, William L, Fieldman, Thomas, du Plessis, Louis, Hill, Verity, Blane, Beth, Watkins, Emmeline, Wright, Elizabeth
et al (show 33 more authors) (2022) Genomic epidemiology of SARS-CoV-2 in a UK university identifies dynamics of transmission. NATURE COMMUNICATIONS, 13 (1). 751-.


Vöhringer, Harald S, Sanderson, Theo, Sinnott, Matthew, De Maio, Nicola, Nguyen, Thuy, Goater, Richard, Schwach, Frank, Harrison, Ian, Hellewell, Joel, Ariani, Cristina V
et al (show 923 more authors) (2021) Genomic reconstruction of the SARS-CoV-2 epidemic in England. Nature, 600 (7889). pp. 506-511.


Carey, Megan E ORCID: 0000-0002-7797-9080, Dyson, Zoe A ORCID: 0000-0002-8887-3492, Ingle, Danielle J, Amir, Afreenish, Aworh, Mabel K, Chattaway, Marie Anne, Chew, Ka Lip, Crump, John A ORCID: 0000-0002-4529-102X, Feasey, Nicholas A, Howden, Benjamin P ORCID: 0000-0003-0237-1473
et al (show 105 more authors) (2023) Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 <i>Salmonella</i> Typhi genomes. eLife, 12. e85867-.


Gibani, Malick M, Jones, Elizabeth, Barton, Amber, Jin, Celina, Meek, Juliette, Camara, Susana, Galal, Ushma, Heinz, Eva, Rosenberg-Hasson, Yael, Obermoser, Gerlinde
et al (show 17 more authors) (2019) Investigation of the role of typhoid toxin in acute typhoid fever in a human challenge model. NATURE MEDICINE, 25 (7). 1082-+.


Wong, Vanessa K, Holt, Kathryn E, Okoro, Chinyere, Baker, Stephen, Pickard, Derek J, Marks, Florian, Page, Andrew J, Olanipekun, Grace, Munir, Huda, Alter, Roxanne
et al (show 21 more authors) (2016) Molecular Surveillance Identifies Multiple Transmissions of Typhoid in West Africa. PLOS NEGLECTED TROPICAL DISEASES, 10 (9). e0004781-.


Pham Thanh, Duy, Thompson, Corinne N, Rabaa, Maia A ORCID: 0000-0003-0529-2228, Sona, Soeng, Sopheary, Sun, Kumar, Varun, Moore, Catrin ORCID: 0000-0002-8639-9846, Tran Vu Thieu, Nga, Wijedoru, Lalith, Holt, Kathryn E ORCID: 0000-0003-3949-2471
et al (show 8 more authors) (2016) The Molecular and Spatial Epidemiology of Typhoid Fever in Rural Cambodia. PLoS neglected tropical diseases, 10 (6). e0004785-.


Langridge, Gemma C, Fookes, Maria, Connor, Thomas R, Feltwell, Theresa, Feasey, Nicholas, Parsons, Bryony N ORCID: 0000-0003-3599-1089, Seth-Smith, Helena MB, Barquist, Lars, Stedman, Anna, Humphrey, Tom
et al (show 9 more authors) (2015) Patterns of genome evolution that have accompanied host adaptation in Salmonella. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 112 (03). pp. 863-868.


Wong, Vanessa K, Baker, Stephen, Pickard, Derek J, Parkhill, Julian, Page, Andrew J, Feasey, Nicholas A, Kingsley, Robert A, Thomson, Nicholas R, Keane, Jacqueline A, Weill, François-Xavier
et al (show 64 more authors) (2015) Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events. Nature Genetics, 47 (06). pp. 632-639.


Feasey, Nicholas A, Gaskell, Katherine, Wong, Vanessa, Msefula, Chisomo, Selemani, George, Kumwenda, Save, Allain, Theresa J, Mallewa, Jane, Kennedy, Neil, Bennett, Aisleen
et al (show 7 more authors) (2015) Rapid Emergence of Multidrug Resistant, H58-Lineage <i>Salmonella</i> Typhi in Blantyre, Malawi. PLOS NEGLECTED TROPICAL DISEASES, 9 (4). e0003748-.


Darton, Thomas C, Meiring, James E, Tonks, Susan, Khan, Md Arifuzzaman, Khanam, Farhana, Shakya, Mila, Thindwa, Deus, Baker, Stephen, Basnyat, Buddha, Clemens, John D
et al (show 10 more authors) (2017) The STRATAA study protocol: a programme to assess the burden of enteric fever in Bangladesh, Malawi and Nepal using prospective population census, passive surveillance, serological studies and healthcare utilisation surveys. BMJ OPEN, 7 (6). e016283-.


Holt, Kathryn E, Thieu Nga, Tran Vu, Thanh, Duy Pham, Vinh, Ha, Kim, Dong Wook, Vu Tra, My Phan, Campbell, James I, Hoang, Nguyen Van Minh, Vinh, Nguyen Thanh, Minh, Pham Van
et al (show 20 more authors) (2013) Tracking the establishment of local endemic populations of an emergent enteric pathogen. Proceedings of the National Academy of Sciences, 110 (43). pp. 17522-17527.


Meiring, James E, Gibani, Malick, Basnyat, Buddha, Bentsi-Enchill, Adwoa D, Clemens, John, Darton, Thomas C, Date, Kashmira, Dougan, Gordon, Garrett, Denise, Gessner, Bradford D
et al (show 15 more authors) (2017) The Typhoid Vaccine Acceleration Consortium (TyVAC): Vaccine effectiveness study designs: Accelerating the introduction of typhoid conjugate vaccines and reducing the global burden of enteric fever. Report from a meeting held on 26-27 October 2016, Oxford, UK. VACCINE, 35 (38). pp. 5081-5088.


Tran Vu Thieu, Nga, Trinh Van, Tan, Tran Tuan, Anh, Klemm, Elizabeth J, Nguyen Ngoc Minh, Chau, Voong Vinh, Phat, Pham Thanh, Duy, Ho Ngoc Dan, Thanh, Pham Duc, Trung, Langat, Pinky
et al (show 19 more authors) (2017) An evaluation of purified Salmonella Typhi protein antigens for the serological diagnosis of acute typhoid fever. The Journal of infection, 75 (2). pp. 104-114.


Wong, Vanessa K, Baker, Stephen ORCID: 0000-0003-1308-5755, Connor, Thomas R ORCID: 0000-0003-2394-6504, Pickard, Derek, Page, Andrew J, Dave, Jayshree, Murphy, Niamh, Holliman, Richard, Sefton, Armine, Millar, Michael
et al (show 4 more authors) (2016) An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid. Nature communications, 7 (1). 12827-.


Cuypers, Wim L, Meysman, Pieter, Weill, François-Xavier, Hendriksen, Rene S, Beyene, Getenet, Wain, John, Nair, Satheesh, Chattaway, Marie A, Perez-Sepulveda, Blanca M, Ceyssens, Pieter-Jan
et al (show 19 more authors) (2023) A global genomic analysis of Salmonella Concord reveals lineages with high antimicrobial resistance in Ethiopia. Nature communications, 14 (1). p. 3517.

This list was generated on Sat Oct 28 08:18:11 2023 BST.