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Moore, Shona ORCID: 0000-0001-8610-2806, Penrice-Randal, Rebekah ORCID: 0000-0002-0653-2097, Alruwaili, Muhannad, Dong, Xiaofeng, Pullan, Steven, Carter, Daniel, Bewley, Kevin ORCID: 0000-0002-9078-6734, Zhao, Qin, Sun, Yani, Hartley, Catherine et al (show 20 more authors) , Zhou, En-min, Solomon, Tom, Beadsworth, Michael, Cruise, James, Bogaert, Debby, Crook, Derrick ORCID: 0000-0002-0590-2850, Matthews, David ORCID: 0000-0003-4611-8795, Davidson, Andrew, Mahmood, Zana ORCID: 0000-0001-6000-6648, Aljabr, Waleed, Druce, Julian, Vipond, Richard, Ng, Lisa, Renia, Laurent, Openshaw, Peter, Baillie, Kenneth, Carroll, Miles, Semple, Malcolm ORCID: 0000-0001-9700-0418, Turtle, Lance and Hiscox, Julian (2020) Amplicon based MinION sequencing of SARS-CoV-2 and metagenomic characterisation of nasopharyngeal swabs from patients with COVID-19. medrxiv.

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Moore, Shona C ORCID: 0000-0001-8610-2806, Penrice-Randal, Rebekah ORCID: 0000-0002-0653-2097, Alruwaili, Muhannad, Randle, Nadine ORCID: 0000-0002-3775-9585, Armstrong, Stuart ORCID: 0000-0002-3862-1801, Hartley, Catherine, Haldenby, Sam, Dong, Xiaofeng, Alrezaihi, Abdulrahman, Almsaud, Mai et al (show 36 more authors) , Bentley, Eleanor, Clark, Jordan, Garcia-Dorival, Isabel ORCID: 0000-0002-5654-5662, Gilmore, Paul, Han, Ximeng, Jones, Benjamin, Luu, Lisa ORCID: 0000-0002-7748-5961, Sharma, Parul, Shawli, Ghada, Sun, Yani, Zhao, Qin, Pullan, Steven T, Carter, Daniel P, Bewley, Kevin, Dunning, Jake, Zhou, En-min, Solomon, Tom ORCID: 0000-0001-7266-6547, Beadsworth, Michael, Cruise, James, Crook, Derrick W, Matthews, David A, Davidson, Andrew D, Mahmood, Zana ORCID: 0000-0001-6000-6648, Aljabr, Waleed ORCID: 0000-0002-9385-2776, Druce, Julian, Vipond, Richard, Ng, Lisa ORCID: 0000-0003-4071-5222, Renia, Laurent, Openshaw, Peter JM, Baillie, J Kenneth, Carroll, Miles W, Stewart, James ORCID: 0000-0002-8928-2037, Darby, Alistair ORCID: 0000-0002-3786-6209, Semple, Malcolm ORCID: 0000-0001-9700-0418, Turtle, Lance ORCID: 0000-0002-0778-1693 and Hiscox, Julian A ORCID: 0000-0002-6582-0275 (2020) Amplicon-Based Detection and Sequencing of SARS-CoV-2 in Nasopharyngeal Swabs from Patients With COVID-19 and Identification of Deletions in the Viral Genome That Encode Proteins Involved in Interferon Antagonism. VIRUSES-BASEL, 12 (10). 1164-.

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Prince, Tessa ORCID: 0000-0002-8796-2629, Dong, Xiaofeng, Penrice-Randal, Rebekah ORCID: 0000-0002-0653-2097, Randle, Nadine ORCID: 0000-0002-3775-9585, Hartley, Catherine, Goldswain, Hannah ORCID: 0000-0003-4194-8714, Jones, Benjamin, Semple, Malcolm G ORCID: 0000-0001-9700-0418, Baillie, J Kenneth, Openshaw, Peter JM et al (show 9 more authors) , Turtle, Lance, Hughes, Grant L, Anderson, Enyia R, Patterson, Edward I, Druce, Julian, Screaton, Gavin, Carroll, Miles W, Stewart, James P ORCID: 0000-0002-8928-2037 and Hiscox, Julian A ORCID: 0000-0002-6582-0275 (2022) Analysis of SARS-CoV-2 in Nasopharyngeal Samples from Patients with COVID-19 Illustrates Population Variation and Diverse Phenotypes, Placing the Growth Properties of Variants of Concern in Context with Other Lineages. MSPHERE, 7 (3). e0091321-.

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Ryan, Kathryn A, Bewley, Kevin R, Fotheringham, Susan A, Slack, Gillian S, Brown, Phillip, Hall, Yper, Wand, Nadina I, Marriott, Anthony C, Cavell, Breeze E, Tree, Julia A et al (show 45 more authors) , Allen, Lauren, Aram, Marilyn J, Bean, Thomas J, Brunt, Emily, Buttigieg, Karen R, Carter, Daniel P, Cobb, Rebecca, Coombes, Naomi S, Findlay-Wilson, Steve J, Godwin, Kerry J, Gooch, Karen E, Gouriet, Jade, Halkerston, Rachel, Harris, Debbie J, Hender, Thomas H, Humphries, Holly E, Hunter, Laura, Ho, Catherine MK, Kennard, Chelsea L, Leung, Stephanie, Longet, Stephanie, Ngabo, Didier, Osman, Karen L, Paterson, Jemma, Penn, Elizabeth J, Pullan, Steven T, Rayner, Emma, Skinner, Oliver, Steeds, Kimberley, Taylor, Irene, Tipton, Tom, Thomas, Stephen, Turner, Carrie, Watson, Robert J, Wiblin, Nathan R, Charlton, Sue, Hallis, Bassam, Hiscox, Julian A ORCID: 0000-0002-6582-0275, Funnell, Simon, Dennis, Mike J, Whittaker, Catherine J, Catton, Michael G, Druce, Julian, Salguero, Francisco J and Carroll, Miles W (2021) Dose-dependent response to infection with SARS-CoV-2 in the ferret model and evidence of protective immunity. NATURE COMMUNICATIONS, 12 (1). 81-.

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Prince, Tessa, Dong, Xiaofeng, Penrice-Randal, Rebekah, Randle, Nadine, Hartley, Catherine, Goldswain, Hannah, Jones, Benjamin ORCID: 0000-0002-5162-9357, Semple, Malcolm ORCID: 0000-0001-9700-0418, Baillie, Kenneth ORCID: 0000-0001-5258-793X, Openshaw, Peter ORCID: 0000-0002-7220-2555 et al (show 10 more authors) , Turtle, Lance, Hughes, Grant ORCID: 0000-0002-7567-7185, Anderson, Enyia, Patterson, Edward, Druce, Julian, Screaton, Gavin, Carroll, Miles, Stewart, James, Hiscox, Julian and ISARIC4C Investigators, (2021) Sequence analysis of SARS-CoV-2 in nasopharyngeal samples from patients with COVID-19 illustrates population variation and diverse phenotypes, placing the in vitro growth properties of B.1.1.7 and B.1.351 lineage viruses in context. [Preprint]