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Singh, Lavanya, San, James E, Tegally, Houriiyah, Brzoska, Pius M, Anyaneji, Ugochukwu J, Wilkinson, Eduan, Clark, Lindsay, Giandhari, Jennifer, Pillay, Sureshnee, Lessells, Richard J et al (show 4 more authors) , Martin, Darren Patrick, Furtado, Manohar, Kiran, Anmol M ORCID: 0000-0003-2680-2303 and de Oliveira, Tulio (2022) Targeted Sanger sequencing to recover key mutations in SARS- CoV-2 variant genome assemblies produced by next-generation sequencing. MICROBIAL GENOMICS, 8 (3). 000774-.

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O'Toole, Áine ORCID: 0000-0001-8083-474X, Hill, Verity, Pybus, Oliver G, Watts, Alexander, Bogoch, Issac I ORCID: 0000-0003-1590-6748, Khan, Kamran, Messina, Jane P, COVID-19 Genomics UK (COG-UK) consortium, , Network for Genomic Surveillance in South Africa (NGS-SA), , Brazil-UK CADDE Genomic Network, et al (show 90 more authors) , Tegally, Houriiyah, Lessells, Richard R ORCID: 0000-0003-0926-710X, Giandhari, Jennifer, Pillay, Sureshnee ORCID: 0000-0001-9288-7996, Tumedi, Kefentse Arnold, Nyepetsi, Gape, Kebabonye, Malebogo, Matsheka, Maitshwarelo ORCID: 0000-0002-7124-9343, Mine, Madisa, Tokajian, Sima ORCID: 0000-0002-3653-8940, Hassan, Hamad, Salloum, Tamara ORCID: 0000-0002-2689-4175, Merhi, Georgi ORCID: 0000-0002-5558-4088, Koweyes, Jad ORCID: 0000-0003-2010-6016, Geoghegan, Jemma L, de Ligt, Joep ORCID: 0000-0002-0348-419X, Ren, Xiaoyun, Storey, Matthew, Freed, Nikki E, Pattabiraman, Chitra ORCID: 0000-0002-9707-3358, Prasad, Pramada, Desai, Anita S, Vasanthapuram, Ravi, Schulz, Thomas F ORCID: 0000-0001-8792-5345, Steinbrück, Lars ORCID: 0000-0001-9142-7146, Stadler, Tanja, Swiss Viollier Sequencing Consortium, , Parisi, Antonio, Bianco, Angelica ORCID: 0000-0002-6156-4657, García de Viedma, Darío, Buenestado-Serrano, Sergio ORCID: 0000-0003-1739-4459, Borges, Vítor ORCID: 0000-0003-3767-2209, Isidro, Joana ORCID: 0000-0002-8529-9878, Duarte, Sílvia ORCID: 0000-0003-2943-5975, Gomes, João Paulo ORCID: 0000-0002-2697-2399, Zuckerman, Neta S, Mandelboim, Michal, Mor, Orna, Seemann, Torsten, Arnott, Alicia, Draper, Jenny ORCID: 0000-0002-6916-6442, Gall, Mailie ORCID: 0000-0001-7018-2426, Rawlinson, William, Deveson, Ira ORCID: 0000-0003-3861-0472, Schlebusch, Sanmarié, McMahon, Jamie, Leong, Lex, Lim, Chuan Kok ORCID: 0000-0002-2828-2922, Chironna, Maria ORCID: 0000-0002-1043-1256, Loconsole, Daniela ORCID: 0000-0003-2057-9745, Bal, Antonin, Josset, Laurence, Holmes, Edward, St George, Kirsten, Lasek-Nesselquist, Erica, Sikkema, Reina S, Oude Munnink, Bas, Koopmans, Marion, Brytting, Mia, Sudha Rani, V ORCID: 0000-0002-7161-9527, Pavani, S, Smura, Teemu, Heim, Albert, Kurkela, Satu, Umair, Massab, Salman, Muhammad, Bartolini, Barbara, Rueca, Martina, Drosten, Christian, Wolff, Thorsten ORCID: 0000-0001-7688-236X, Silander, Olin, Eggink, Dirk, Reusken, Chantal, Vennema, Harry, Park, Aekyung, Carrington, Christine ORCID: 0000-0001-6533-9302, Sahadeo, Nikita, Carr, Michael ORCID: 0000-0003-0011-6209, Gonzalez, Gabo, SEARCH Alliance San Diego, , National Virus Reference Laboratory, , SeqCOVID-Spain, , Danish Covid-19 Genome Consortium (DCGC), , Communicable Diseases Genomic Network (CDGN), , Dutch National SARS-CoV-2 surveillance program, , Division of Emerging Infectious Diseases (KDCA), , de Oliveira, Tulio, Faria, Nuno ORCID: 0000-0001-8839-2798, Rambaut, Andrew and Kraemer, Moritz UG (2021) Tracking the international spread of SARS-CoV-2 lineages B.1.1.7 and B.1.351/501Y-V2 with grinch. Wellcome open research, 6. 121-.

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San, James E, Ngcapu, Sinaye, Kanzi, Aquillah M, Tegally, Houriiyah, Fonseca, Vagner, Giandhari, Jennifer, Wilkinson, Eduan, Nelson, Chase W, Smidt, Werner, Kiran, Anmol M ORCID: 0000-0003-2680-2303 et al (show 9 more authors) , Chimukangara, Benjamin, Pillay, Sureshnee, Singh, Lavanya, Fish, Maryam, Gazy, Inbal, Martin, Darren P, Khanyile, Khulekani, Lessells, Richard and de Oliveira, Tulio (2021) Transmission dynamics of SARS-CoV-2 within-host diversity in two major hospital outbreaks in South Africa. VIRUS EVOLUTION, 7 (1). veab041-.