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Geretti, Anna Maria ORCID: 0000-0002-3670-6588, Brook, Gary, Cameron, Claire, Chadwick, David, French, Neil ORCID: 0000-0003-4814-8293, Heyderman, Robert, Ho, Antonia ORCID: 0000-0003-1465-3785, Hunter, Michael, Ladhani, Shamez, Lawton, Mark et al (show 4 more authors) , MacMahon, Eithne, McSorley, John, Pozniak, Anton and Rodger, Alison (2016) British HIV Association Guidelines on the Use of Vaccines in HIV-Positive Adults 2015. HIV MEDICINE, 17 (S3). S2-S81.

Nishihara, Yo, Dangor, Ziyaad, French, Neil ORCID: 0000-0003-4814-8293, Madhi, Shabir and Heyderman, Robert (2017) Challenges in reducing group B <i>Streptococcus</i> disease in African settings. ARCHIVES OF DISEASE IN CHILDHOOD, 102 (1). pp. 72-77.

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Koenraads, Marianne, Swarthout, Todd ORCID: 0000-0001-5285-7039, Bar-Zeev, Naor ORCID: 0000-0003-0570-4624, Brown, Comfort, Msefula, Jacquline ORCID: 0000-0002-3997-6102, Denis, Brigitte, Dube, Queen, Gordon, Stephen ORCID: 0000-0001-6576-1116, Heyderman, Robert ORCID: 0000-0003-4573-449X, Gladstone, Melissa ORCID: 0000-0002-2579-9301 et al (show 1 more authors) and French, Neil ORCID: 0000-0003-4814-8293 (2021) Changing incidence of invasive pneumococcal disease in infants less than 90 days of age before and after introduction of the 13-valent Pneumococcal Conjugate Vaccine in Blantyre, Malawi: a 14-year hospital based surveillance study. [Preprint]

Ellis, Jayne ORCID: 0000-0002-7009-9144, Kalata, Newton ORCID: 0000-0003-1715-8093, Dziwani, Eltas, Matope, Agnes, Wang, Duolao, Molloy, Síle ORCID: 0000-0001-8847-2325, Harrison, Thomas, Lalloo, David ORCID: 0000-0001-7680-2200, Sloan, Derek ORCID: 0000-0002-7888-5449 and Heyderman, Robert ORCID: 0000-0003-4573-449X (2021) Co-prevalent infections in adults with HIV-associated cryptococcal meningitis are associated with an increased risk of death: a nested analysis of the Advancing Cryptococcal meningitis Treatment for Africa (ACTA) cohort. Wellcome Open Research, 6. p. 19.

Moxon, Chris Coagulation and the endothelium in malawian children with cerebral malaria. Doctor of Philosophy thesis, University of Liverpool.

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Afran, Louise ORCID: 0000-0003-4417-6318, Jambo, Kondwani C ORCID: 0000-0002-3195-2210, Nedi, Wilfred, Miles, David Jc, Kiran, Anmol ORCID: 0000-0003-2680-2303, Banda, Domimic H, Kamg'ona, Ralph, Burger, Annette, Nastouli, Eleni, Ferne, Brigit et al (show 6 more authors) , Mwandumba, Henry C, Moss, Paul, Goldblatt, David, Jones, Sarah Rowland, Finn, Adam and Heyderman, Robert (2021) Defective monocyte enzymatic function and an inhibitory immune phenotype in HIV-exposed uninfected African infants in the era of anti-retroviral therapy. EUROPEAN JOURNAL OF IMMUNOLOGY, 51 (7). p. 147.

Bennett, Aisleen, Bar-Zeev, Naor ORCID: 0000-0003-0570-4624, Jere, Khuzwayo ORCID: 0000-0003-3376-8529, Tate, JE, Parashar, UD, Nakagomi, Osamu, Heyderman, Robert, French, Neil ORCID: 0000-0003-4814-8293, Iturriza-Gomara, Miren ORCID: 0000-0001-5816-6423 and Cunliffe, Nigel ORCID: 0000-0002-5449-4988 (2015) Determination of a Viral Load Threshold To Distinguish Symptomatic versus Asymptomatic Rotavirus Infection in a High-Disease-Burden African Population. Journal of Clinical Microbiology, 53 (6). pp. 1951-1954.

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Fachrul, Muhamad, Karkey, Abhilasha M, Shakya, Mila, Judd, Louise, Harshegyi, Taylor, Sim, Kar Seng, Tonks, Susan, Dongol, Sabina, Shrestha, Rajendra, Salim, Agus et al (show 38 more authors) , STRATAA Study Grp, Happy Chimphako, Adhikari, Anup, Banda, Happy Chimphako C, Blohmke, Christoph, Darton, Thomas, Farooq, Yama, Ghimire, Maheshwar, Hill, Jennifer, Hoang, Nhu Tran, Jere, Tikhala Makhaza, Kamzati, Moses, Kao, Yu-Han, Masesa, Clemens, Mbewe, Maurice, Msuku, Harrison, Munthali, Patrick, Nga, Tran Vu Thieu J, Nkhata, Rose, Saad, Neil, Tan, Trinh Van, Thindwa, Deus, Khanam, Farhana D, Meiring, James, Clemens, John E, Dougan, Gordon, Pitzer, Virginia S, Qadri, Firdausi A, Heyderman, Robert, Gordon, Melita ORCID: 0000-0002-0629-0884, Voysey, Merryn J, Baker, Stephen, Pollard, Andrew, Khor, Chiea Chuen, Dolecek, Christiane J, Basnyat, Buddha E, Dunstan, Sarah, Holt, Kathryn and Inouye, Michael (2023) Direct inference and control of genetic population structure from RNA sequencing data. COMMUNICATIONS BIOLOGY, 6 (1). 804-.

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Chaguza, Chrispin ORCID: 0000-0002-2108-1757, Heinsbroek, Ellen, Gladstone, Rebecca, Tafatatha, Terence, Alaerts, Maaike, Peno, Chikondi, Cornick, Jennifer, Musicha, Patrick, Bar-Zeev, Naor ORCID: 0000-0003-0570-4624, Kamng’ona, Arox et al (show 8 more authors) , Kadioglu, Aras ORCID: 0000-0003-1137-6321, Mcgee, Lesley, Hanage, William, Breiman, Robert, Heyderman, Robert, French, Neil ORCID: 0000-0003-4814-8293, Everett, Dean and Bentley, Stephen (2020) Early Signals of Vaccine-driven Perturbation Seen in Pneumococcal Carriage Population Genomic Data. Clinical Infectious Diseases, 70 (7). 1294 - 1303.

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Chaguza, Chrispin ORCID: 0000-0002-2108-1757, Heinsbroek, Ellen, Gladstone, Rebecca, Tafatatha, Terence, Alaerts, Maaike, Peno, Chikondi, Cornick, Jennifer, Musicha, Patrick, Bar-Zeev, Naor ORCID: 0000-0003-0570-4624, Kamng’ona, Arox et al (show 8 more authors) , Kadioglu, Aras ORCID: 0000-0003-1137-6321, Mcgee, Lesley, Hanage, William, Breiman, Robert, Heyderman, Robert, French, Neil ORCID: 0000-0003-4814-8293, Everett, Dean and Bentley, Stephen (2020) Early Signals of Vaccine-driven Perturbation Seen in Pneumococcal Carriage Population Genomic Data. Clinical Infectious Diseases, 70 (7). pp. 1294-1303.

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Chaguza, Chrispin ORCID: 0000-0002-2108-1757, Heinsbroek, Ellen, Gladstone, Rebecca, Tafatatha, Terence, Alaerts, Maaike, Peno, Chikondi, Cornick, Jennifer, Musicha, Patrick, Bar-Zeev, Naor ORCID: 0000-0003-0570-4624, Kamng’ona, Arox et al (show 8 more authors) , Kadioglu, Aras ORCID: 0000-0003-1137-6321, Mcgee, Lesley, Hanage, William, Breiman, Robert, Heyderman, Robert, French, Neil ORCID: 0000-0003-4814-8293, Everett, Dean and Bentley, Stephen (2018) Early signals of vaccine driven perturbation seen in pneumococcal carriage population genomic data. BioRxiv.

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Thindwa, Deus ORCID: 0000-0003-4845-7862, Farooq, Yama, Shakya, Mila, Saha, Nirod, Tonks, Susan, Anokwa, Yaw, Gordon, Melita ORCID: 0000-0002-0629-0884, Hartung, Carl, Meiring, James, Pollard, Andrew ORCID: 0000-0001-7361-719X et al (show 2 more authors) , Heyderman, Robert ORCID: 0000-0003-4573-449X and The Strategic Typhoid alliance across Africa and Asia consortium, (2020) Electronic data capture for large scale typhoid surveillance, household contact tracing, and health utilisation survey: Strategic Typhoid Alliance across Africa and Asia. Wellcome Open Res, 5. 66-.

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Thindwa, Deus, Farooq, Yama, Shakya, Mila, Saha, Nirod, Tonks, Susan, Anokwa, Yaw, Gordon, Melita ORCID: 0000-0002-0629-0884, Hartung, Carl, Meiring, James, Pollard, Andrew et al (show 2 more authors) , Heyderman, Robert and The Strategic Typhoid alliance across Africa and Asia consortium, (2020) Electronic data capture for large scale typhoid surveillance, household contact tracing, and health utilisation survey: Strategic Typhoid Alliance across Africa and Asia [version 2; peer review: 2 approved, 2 approved with reservations]. Wellcome Open Research, 5. 66-.

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Iroh Tam, Pui-Ying, Musicha, Patrick, Kawaza, Kondwani, Cornick, Jenifer, Denis, Brigitte, Freyne, Bridget ORCID: 0000-0002-9542-1582, Everett, Dean, Dube, Queen, French, Neil ORCID: 0000-0003-4814-8293, Feasey, Nicholas et al (show 1 more authors) and Heyderman, Robert (2019) Emerging Resistance to Empiric Antimicrobial Regimens for Pediatric Bloodstream Infections in Malawi (1998–2017). Clinical Infectious Diseases, 69 (1). pp. 61-68.

Swarthout, Todd (2022) Evaluating impact and effectiveness of the 13-valent pneumococcal conjugate vaccine on Streptococcus pneumoniae vaccine-serotype pneumococcal carriage and population incidence of invasive pneumococcal disease in Blantyre, Malawi. PhD thesis, University of Liverpool.

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Gliddon, Harriet D, Kaforou, Myrsini, Alikian, Mary, Habgood-Coote, Dominic, Zhou, Chenxi, Oni, Tolu, Anderson, Suzanne T, Brent, Andrew J, Crampin, Amelia C, Eley, Brian et al (show 11 more authors) , Heyderman, Robert, Kern, Florian, Langford, Paul R, Ottenhoff, Tom HM, Hibberd, Martin L, French, Neil ORCID: 0000-0003-4814-8293, Wright, Victoria J, Dockrell, Hazel M, Coin, Lachlan J, Wilkinson, Robert J and Levin, Michael (2021) Identification of Reduced Host Transcriptomic Signatures for Tuberculosis Disease and Digital PCR-Based Validation and Quantification. Frontiers in Immunology, 12. 637164-.

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Shi, Yuan, Thompson, Jennifer, Walker, A Sarah, Paton, Nicholas I, Cheung, Yin Bun, Agweng, E, Awio, P, Bakeinyaga, G, Isabirye, C, Kabuga, U et al (show 272 more authors) , Kasuswa, S, Katuramu, M, Kityo, C, Kiweewa, F, Kyomugisha, H, Lutalo, E, Mugyenyi, P, Mulima, D, Musana, H, Musitwa, G, Musiime, V, Ndigendawan, M, Namata, H, Nkalubo, J, Labejja, P Ocitti, Okello, P, Olal, P, Pimundu, G, Segonga, P, Ssali, F, Tamale, Z, Tumukunde, D, Namala, W, Byaruhanga, R, Kayiwa, J, Tukamushaba, J, Abunyang, S, Eram, D, Denis, O, Lwalanda, R, Mugarura, L, Namusanje, J, Nankya, I, Ndashimye, E, Nabulime, E, Mulima, D, Senfuma, O, Bihabwa, G, Buluma, E, Easterbrook, P, Elbireer, A, Kambugu, A, Kamya, D, Katwere, M, Kiggundu, R, Komujuni, C, Laker, E, Lubwama, E, Mambule, I, Matovu, J, Nakajubi, A, Nakku, J, Nalumenya, R, Namuyimbwa, L, Semitala, F, Wandera, B, Wanyama, J, Mugerwa, H, Lugemwa, A, Ninsiima, E, Ssenkindu, T, Mwebe, S, Atwine, L, William, H, Katemba, C, Abunyang, S, Acaku, M, Ssebutinde, P, Kitizo, H, Kukundakwe, J, Naluguza, M, Ssegawa, K, Namayanja, , Nsibuka, F, Tuhirirwe, P, Fortunate, M, Acen, J, Achidri, J, Amone, A, Chamai, M, Ditai, J, Kemigisa, M, Kiconco, M, Matama, C, Mbanza, D, Nambaziira, F, Odoi, M Owor, Rweyora, A, Tumwebaze, G, Kalanzi, H, Katabaazi, J, Kiyingi, A, Mbidde, M, Mugenyi, M, Mwebaze, R, Okong, P, Senoga, I, Abwola, M, Baliruno, D, Bwomezi, J, Kasede, A, Mudoola, M, Namisi, R, Ssennono, F, Tuhirwe, S, Abongomera, G, Amone, G, Abach, J, Aciro, I, Arach, B, Kidega, P, Omongin, J, Ocung, E, Odong, W, Philliam, A, Alima, H, Ahimbisibwe, B, Atuhaire, E, Atukunda, F, Bekusike, G, Bulegyeya, A, Kahatano, D, Kamukama, S, Kyoshabire, J, Nassali, A, Mbonye, A, Naturinda, TM, Ndukukire, , Nshabohurira, A, Ntawiha, H, Rogers, A, Tibyasa, M, Kiirya, S, Atwongyeire, D, Nankya, A, Draleku, C, Nakiboneka, D, Odoch, D, Lakidi, L, Ruganda, R, Abiriga, R, Mulindwa, M, Balmoi, F, Kafuma, S, Moriku, E, Hakim, J, Reid, A, Chidziva, E, Musoro, G, Warambwa, C, Tinago, G, Mutsai, S, Phiri, M, Mudzingwa, S, Bafana, T, Masore, V, Moyo, C, Nhema, R, Chitongo, S, Heyderman, Robert, Kabanga, Lucky, Kaunda, Symon, Kudzala, Aubrey, Lifa, Linly, Mallewa, Jane, Moore, Mike, Mtali, Chrissie, Musowa, George, Mwimaniwa, Grace, Sikwese, Rosemary, van Oosterhout, Joep, Ziwoya, Milton, Chimbaka, H, Chitete, B, Kamanga, S, Kayinga, T, Makwakwa, E, Mbiya, R, Mlenga, M, Mphande, T, Mtika, C, Mushani, G, Ndhlovu, O, Ngonga, M, Nkhana, I, Nyirenda, R, Cheruiyot, P, Kwobah, C, Ekiru, W Lokitala, Mokaya, M, Mudogo, A, Nzioka, A, Siika, A, Tanui, M, Wachira, S, Wools-Kaloustian, K, Alipalli, P, Chikatula, E, Kipaila, J, Kunda, I, Lakhi, S, Malama, J, Mufwambi, W, Mulenga, L, Mwaba, P, Mwamba, E, Mweemba, A, Namfukwe, M, Kerukadho, E, Ngwatu, B, Birungi, J, Paton, N, Boles, J, Burke, A, Castle, L, Ghuman, S, Kendall, L, Hoppe, A, Tebbs, S, Thomason, M, Thompson, J, Walker, S, Whittle, J, Wilkes, H, Young, N, Kapuya, C, Kyomuhendo, F, Kyakundi, D, Mkandawire, N, Mulambo, S, Senyonjo, S, Angus, B, Arenas-Pinto, A, Palfreeman, A, Post, F, Ishola, D, Arribas, J, Colebunders, R, Floridia, M, Giuliano, M, Mallon, P, Walsh, P, De Rosa, M, Rinaldi, E, Weller, I, Gilks, C, Hakim, J, Kangewende, A, Lakhi, S, Luyirika, E, Miiro, F, Mwamba, P, Mugyenyi, P, Ojoo, S, Paton, N, Phiri, S, van Oosterhout, J, Siika, A, Walker, S, Wapakabulo, A, Peto, T, French, N ORCID: 0000-0003-4814-8293, Matenga, J, Cloherty, G, van Wyk, J, Norton, M, Lehrman, S, Lamba, P, Malik, K, Rooney, J, Snowden, W and Villacian, J (2019) Mapping the medical outcomes study HIV health survey (MOS-HIV) to the EuroQoL 5 Dimension (EQ-5D-3L) utility index. HEALTH AND QUALITY OF LIFE OUTCOMES, 17 (1). 83-.

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Ellis, Jayne, Gaskell, Kate ORCID: 0000-0003-4691-6359, Peirse, Mary, Gormley, Jack ORCID: 0000-0001-8602-7498, Kalata, Newton, Burgess, Philip ORCID: 0000-0002-3959-2299, Mopamboli, Patty, Manda, Chatonda, Kiire, Christine, Maccormick, Ian et al (show 5 more authors) , Gondwe, Ebbie, Molloy, Sile ORCID: 0000-0001-8847-2325, Harrison, Thomas, Lalloo, David ORCID: 0000-0001-7680-2200 and Heyderman, Robert ORCID: 0000-0003-4573-449X (2019) Ophthalmic features of HIV associated cryptococcal meningitis in Malawian Adults: an observational study. Wellcome Open Research, 4. p. 83.

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Ellis, Jayne ORCID: 0000-0002-7009-9144, Gaskell, Kate ORCID: 0000-0003-4691-6359, Peirse, Mary, Gormley, Jack ORCID: 0000-0001-8602-7498, Kalata, Newton, Burgess, Philip ORCID: 0000-0002-3959-2299, Mopamboli, Patty, Manda, Chatonda, Kiire, Christine, Maccormick, Ian et al (show 5 more authors) , Gondwe, Ebbie, Molloy, Sile ORCID: 0000-0001-8847-2325, Harrison, Thomas, Lalloo, David ORCID: 0000-0001-7680-2200 and Heyderman, Robert ORCID: 0000-0003-4573-449X (2019) Ophthalmic features of HIV associated cryptococcal meningitis in Malawian Adults: an observational study. Wellcome Open Research, 4. p. 83.

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Chirambo, Angeziwa Chunga ORCID: 0000-0001-6500-2902, Nyirenda, Tonney, Jambo, Ndaru, Msefula, Chisomo ORCID: 0000-0003-2304-886X, Kamng'ona, Arox ORCID: 0000-0002-0841-7586, Molina, Sandra, Mandala, Wilson, Heyderman, Robert ORCID: 0000-0003-4573-449X, Iturizza-Gomara, Miren, Henrion, Marc YR ORCID: 0000-0003-1242-839X et al (show 1 more authors) and Gordon, Melita ORCID: 0000-0002-0629-0884 (2021) Performance of molecular methods for the detection of Salmonella in human stool specimens. Wellcome Open Res, 5. 237-.

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Chirambo, Angeziwa Chunga ORCID: 0000-0001-6500-2902, Nyirenda, Tonney, Jambo, Ndaru, Msefula, Chisomo ORCID: 0000-0003-2304-886X, Kamng'ona, Arox ORCID: 0000-0002-0841-7586, Molina, Sandra, Mandala, Wilson, Heyderman, Robert ORCID: 0000-0003-4573-449X, Iturizza-Gomara, Miren, Henrion, Marc YR ORCID: 0000-0003-1242-839X et al (show 1 more authors) and Gordon, Melita ORCID: 0000-0002-0629-0884 (2020) Performance of molecular methods for the detection of Salmonella in human stool specimens. Wellcome Open Research, 5. p. 237.

Pollock, LE (2018) Predictors of vaccine virus replication, immune response and clinical protection following oral rotavirus vaccination in Malawian Children. Doctor of Philosophy thesis, University of Liverpool.

Nyirenda, Deborah ORCID: 0000-0002-5867-4687, Makawa, Tamara Chipasula, Chapita, Greyson, Mdalla, Chisomo, Nkolokosa, Mzati, O'byrne, Thomasena, Heyderman, Robert and Desmond, Nicola ORCID: 0000-0002-2874-8569 (2018) Public engagement in Malawi through a health-talk radio programme "<i>Umoyo nkukambirana</i>': A mixed-methods evaluation. PUBLIC UNDERSTANDING OF SCIENCE, 27 (2). pp. 229-242.

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Swarthout, Todd, Fronterre, Claudio, Lourenco, Jose, Obolski, Uri, Gori, Andrea, Bar zeev, Naor, Everett, Dean, Kamngoma, Arox, Mwalukomo, Thandie, Mataya, Andrew et al (show 6 more authors) , Mwansambo, Charles, Banda, Marjory, Gupta, Sunetra, Diggle, Peter, French, Neil ORCID: 0000-0003-4814-8293 and Heyderman, Robert (2020) Residual carriage of vaccine-serotype Streptococcus pneumoniae after introduction of a pneumococcal conjugate vaccine in Malawi. Nature Communications.

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Jere, Khuzwayo ORCID: 0000-0003-3376-8529, Bar-Zeev, Naor, Chande, Adams, Bennet, Aisleen, Pollock, Louisa, Sanchez, Pedro, Nakagomi, osamu, Tate, Jacqueline, Parashar, Umesh, French, Neil ORCID: 0000-0003-4814-8293 et al (show 3 more authors) , Heyderman, Robert, Iturriza-Gomara, M ORCID: 0000-0001-5816-6423 and Cunliffe, KD (2019) Rotavirus vaccine effectiveness against emerging DS-1-like G1P[8] rotavirus strains among hospitalised infants with acute gastroenteritis in Blantyre, Malawi. Emerging Infectious Diseases.

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MacPherson, Peter ORCID: 0000-0002-0329-9613, Lalloo, David G ORCID: 0000-0001-7680-2200, Choko, Augustine T, Mann, Gillian H, Squire, Stephen Bertel, Mwale, Daniel, Manda, Eddie, Makombe, Simon D, Desmond, Nicola ORCID: 0000-0002-2874-8569, Heyderman, Robert et al (show 1 more authors) and Corbett, Elizabeth L (2012) Suboptimal patterns of provider initiated HIV testing and counselling, antiretroviral therapy eligibility assessment and referral in primary health clinic attendees in Blantyre, Malawi. TROPICAL MEDICINE & INTERNATIONAL HEALTH, 17 (4). pp. 507-517.

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Lester, Rebecca, Haigh, Kate ORCID: 0000-0003-1901-7315, Wood, Alasdair, MacPherson, Eleanor E, Maheswaran, Hendramoorthy ORCID: 0000-0002-7375-4845, Bogue, Patrick, Hanger, Sofia, Kalizang'oma, Akuzike, Srirathan, Vinothan, Kulapani, David et al (show 8 more authors) , Mallewa, Jane, Nyirenda, Mulinda, Jewell, Christopher P, Heyderman, Robert, Gordon, Melita ORCID: 0000-0002-0629-0884, Lalloo, David G ORCID: 0000-0001-7680-2200, Tolhurst, Rachel and Feasey, Nicholas A (2020) Sustained Reduction in Third-generation Cephalosporin Usage in Adult Inpatients Following Introduction of an Antimicrobial Stewardship Program in a Large, Urban Hospital in Malawi. CLINICAL INFECTIOUS DISEASES, 71 (9). E478-E486.

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Meiring, James E, Laurens, Matthew B, Patel, Pratiksha, Patel, Priyanka, Misiri, Theresa, Simiyu, Kenneth, Mwakiseghile, Felistas, Tracy, J Kathleen, Masesa, Clemens, Liang, Yuanyuan et al (show 7 more authors) , Henrion, Marc, Rotrosen, Elizabeth, Gmeiner, Markus, Heyderman, Robert, Kotloff, Karen, Gordon, Melita A ORCID: 0000-0002-0629-0884 and Neuzil, Kathleen M (2019) Typhoid Vaccine Acceleration Consortium Malawi: A Phase III, Randomized, Double-blind, Controlled Trial of the Clinical Efficacy of Typhoid Conjugate Vaccine Among Children in Blantyre, Malawi. CLINICAL INFECTIOUS DISEASES, 68 (Suppl ). S50-S58.

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Kumwenda, Benjamin, Canals, Rocío, Predeus, Alexander ORCID: 0000-0002-2750-1599, Zhu, Xiaojun, Kröger, Carsten, Pulford, Caisey, Wenner, Nicolas, Lora, Lizeth Lacharme, Li, Yan, Owen, Siân et al (show 7 more authors) , Everett, Dean, Hokamp, Karsten, Heyderman, Robert, Ashton, Philip, Gordon, Melita ORCID: 0000-0002-0629-0884, Msefula, Chisomo and Hinton, Jay ORCID: 0000-0003-2671-6026 (2023) <i>Salmonella enterica</i>serovar Typhimurium ST313 sublineage 2.2 has emerged in Malawi with a characteristic gene expression signature and a fitness advantage. [Preprint]