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Kamoto, Kelita, Noyes, Harry ORCID: 0000-0002-0656-200X, Nambala, Peter, Senga, Edward, Musaya-Mwalija, Janelisa, Kumwenda, Benjamin, Bucheton, Bruno, Macleod, Annette, Herz-Fowler, Christiane, Matovu, Enock et al (show 2 more authors) , Chiwaya, Arthur M and Chisi, John E (2019) Association of <i>APOL1</i> renal disease risk alleles with <i>Trypanosoma brucei rhodesiense</i> infection outcomes in the northern part of Malawi. PLOS NEGLECTED TROPICAL DISEASES, 13 (8). e0007603-.

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Ndhlovu, Victor, Kiran, Anmol ORCID: 0000-0003-2680-2303, Sloan, Derek J, Mandala, Wilson, Nliwasa, Marriott, Everett, Dean B, Kumwenda, Benjamin, Mwapasa, Mphatso, Kontogianni, Konstantina, Kamdolozi, Mercy et al (show 3 more authors) , Corbett, Elizabeth, Caws, Maxine and Davies, Gerry ORCID: 0000-0002-3819-490X (2020) Characterization of DNA methylation in Malawian <i>Mycobacterium tuberculosis</i> clinical isolates. PEERJ, 8. e10432-.

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Mhango, Chimwemwe, Banda, Akuzike, Chinyama, End, Mandolo, Jonathan J, Kumwenda, Orpha, Malamba-Banda, Chikondi, Barnes, Kayla G, Kumwenda, Benjamin, Jambo, Kondwani C, Donato, Celeste M et al (show 11 more authors) , Esona, Mathew D, Mwangi, Peter N, Steele, A Duncan, Iturriza-Gomara, Miren, Cunliffe, Nigel A ORCID: 0000-0002-5449-4988, Ndze, Valentine N, Kamng'ona, Arox W ORCID: 0000-0002-0841-7586, Dennis, Francis E, Nyaga, Martin M, Chaguza, Chrispin ORCID: 0000-0002-2108-1757 and Jere, Khuzwayo C ORCID: 0000-0003-3376-8529 (2023) Comparative whole genome analysis reveals re-emergence of human Wa-like and DS-1-like G3 rotaviruses after Rotarix vaccine introduction in Malawi. VIRUS EVOLUTION, 9 (1). vead030-.

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Jere, Khuzwayo C ORCID: 0000-0003-3376-8529, Chaguza, Chrispin ORCID: 0000-0002-2108-1757, Bar-Zeev, Naor ORCID: 0000-0003-0570-4624, Lowe, Jenna, Peno, Chikondi, Kumwenda, Benjamin, Nakagomi, Osamu, Tate, Jacqueline E, Parashar, Umesh D, Heyderman, Robert S et al (show 3 more authors) , French, Neil ORCID: 0000-0003-4814-8293, Cunliffe, Nigel A ORCID: 0000-0002-5449-4988 and Miren, Iturriza-Gomara (2017) Emergence of Double- and Triple-Gene Reassortant G1P[8]Rotaviruses Possessing a DS-1-Like Backbone after RotavirusVaccine Introduction in Malawi. Journal of virology, 92 (3). e01246-e01217.

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Mwangi, Peter N, Page, Nicola A, Seheri, Mapaseka L, Mphahlele, M Jeffrey, Nadan, Sandrama, Esona, Mathew D, Kumwenda, Benjamin, Kamng'ona, Arox W ORCID: 0000-0002-0841-7586, Donato, Celeste M, Steele, Duncan A et al (show 4 more authors) , Ndze, Valantine N, Dennis, Francis E, Jere, Khuzwayo C ORCID: 0000-0003-3376-8529 and Nyaga, Martin M (2022) Evolutionary changes between pre- and post- vaccine South African group A G2P[4] rotavirus strains, 2003-2017. MICROBIAL GENOMICS, 8 (4). 000809-.

Nkhonjera, Joe, Suwedi-Kapesa, Leticia C, Kumwenda, Benjamin and Nyondo-Mipando, Alinane Linda (2021) Factors Influencing Loss to Follow-up among Human Immunodeficiency Virus Exposed Infants in the Early Infant Diagnosis Program in Phalombe, Malawi. GLOBAL PEDIATRIC HEALTH, 8. 2333794X211004166-.

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Pulford, Caisey, Perez-Sepulveda, Blanca M, Canals, Rocio, Bevington, Jessica A, Bengtsson, Rebecca J, Wenner, Nicolas, Rodwell, Ella V, Kumwenda, Benjamin, Zhu, Xioajun, Bennett, Rebecca J ORCID: 0000-0001-5290-5109 et al (show 21 more authors) , Stenhouse, George E, De Silva, Malaka ORCID: 0000-0002-0579-0131, Webster, Hermione J ORCID: 0000-0001-8655-911X, Bengoechea, Jose A, Dumigan, Amy, Tran-Dien, ALicia, Prakash, Reenesh, Banda, Happy C, Alufandika, Lovemore, Mautanga, Mike P, Bowers-Barnard, Arthuer, Beliavskaia, Alexendra Y ORCID: 0000-0002-1194-5689, Predeus, Alexander V ORCID: 0000-0002-2750-1599, Rowe, Will PM, Darby, Alister C ORCID: 0000-0002-3786-6209, Nall, Neil, Weill, Francois-Xavier, Gordon, Melita A ORCID: 0000-0002-0629-0884, Feasey, Nicholas A, Baker, Kate S ORCID: 0000-0001-5850-1949 and Hinton, Jay ORCID: 0000-0003-2671-6026 (2020) Stepwise evolution of Salmonella Typhimurium ST313 causing bloodstream infection in Africa. Nature Microbiology, 6 (3). 327-+.

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Mwangi, Peter N, Mogotsi, Milton T, Seheri, Mapaseka L, Mphahlele, M Jeffrey, Peenze, Ina, Esona, Mathew D, Kumwenda, Benjamin, Steele, A Duncan, Kirkwood, Carl D, Ndze, Valantine N et al (show 3 more authors) , Dennis, Francis E, Jere, Khuzwayo C ORCID: 0000-0003-3376-8529 and Nyaga, Martin M (2020) Whole Genome In-Silico Analysis of South African G1P[8] Rotavirus Strains before and after Vaccine Introduction over a Period of 14 Years. VACCINES, 8 (4). E609-.

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Perez-Sepulveda, Blanca M, Heavens, Darren, Pulford, Caisey V, Predeus, Alexander V ORCID: 0000-0002-2750-1599, Low, Ross, Webster, Hermione, Dykes, Gregory F, Schudoma, Christian, Rowe, Will, Lipscombe, James et al (show 8 more authors) , Watkins, Chris, Kumwenda, Benjamin, Shearer, Neil, Costigan, Karl, Baker, Kate S ORCID: 0000-0001-5850-1949, Feasey, Nicholas A, Hinton, Jay CD ORCID: 0000-0003-2671-6026 and Hall, Neil (2021) An accessible, efficient and global approach for the large-scale sequencing of bacterial genomes. GENOME BIOLOGY, 22 (1). 349-.

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Perez-Sepulveda, Blanca ORCID: 0000-0002-2891-4010, Heavens, Darren, Pulford, Caisey ORCID: 0000-0003-2500-9119, Predeus, Alexander ORCID: 0000-0002-2750-1599, Low, Ross ORCID: 0000-0002-0956-2822, Webster, Hermione, Schudoma, Christian, Rowe, Will ORCID: 0000-0003-0384-4463, Lipscombe, James, Watkins, Chris et al (show 8 more authors) , Kumwenda, Benjamin ORCID: 0000-0002-5775-7528, Shearer, Neil ORCID: 0000-0001-8458-0652, Costigan, Karl, Baker, Kate, Feasey, Nicholas, Hinton, Jay ORCID: 0000-0003-2671-6026, Hall, Neil ORCID: 0000-0003-2808-0009 and The 10KSG consortium, (2020) An accessible, efficient and global approach for the large-scale sequencing of bacterial genomes. Genome Biology. 2020.07.22.200840-.

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Kumwenda, Benjamin, Canals, Rocío, Predeus, Alexander ORCID: 0000-0002-2750-1599, Zhu, Xiaojun, Kröger, Carsten, Pulford, Caisey, Wenner, Nicolas, Lora, Lizeth Lacharme, Li, Yan ORCID: 0000-0002-7480-9545, Owen, Siân et al (show 7 more authors) , Everett, Dean, Hokamp, Karsten, Heyderman, Robert, Ashton, Philip, Gordon, Melita ORCID: 0000-0002-0629-0884, Msefula, Chisomo and Hinton, Jay ORCID: 0000-0003-2671-6026 (2023) <i>Salmonella enterica</i>serovar Typhimurium ST313 sublineage 2.2 has emerged in Malawi with a characteristic gene expression signature and a fitness advantage. [Preprint]