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Betts, Modupeh ORCID: 0000-0003-0083-7487, Jarvis, Seth, Jeffries, Aaron, Gori, Andrea, Chaguza, Chrispin ORCID: 0000-0002-2108-1757, Msefula, Jacquline, Weight, Caroline M, Kwambana-Adams, Brenda, French, Neil ORCID: 0000-0003-4814-8293, Swarthout, Todd D et al (show 2 more authors) , Brown, Jeremy S and Heyderman, Robert S (2021) Complete Genome Sequence of <i>Streptococcus pneumoniae</i> Strain BVJ1JL a Serotype 1 Carriage Isolate from Malawi. MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 10 (39). e0071521-.

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Lo, Stephanie W, Mellor, Kate, Cohen, Robert, Alonso, Alba Redin, Belman, Sophie, Kumar, Narender, Hawkins, Paulina A, Gladstone, Rebecca A, von Gottberg, Anne, Veeraraghavan, Balaji et al (show 29 more authors) , Ravikumar, KL, Kandasamy, Rama, Pollard, Sir Andrew J, Saha, Samir K, Bigogo, Godfrey, Antonio, Martin, Kwambana-Adams, Brenda, Mirza, Shaper, Shakoor, Sadia, Nisar, Imran, Cornick, Jennifer E, Lehmann, Deborah, Ford, Rebecca L, Sigauque, Betuel, Turner, Paul, Moisi, Jennifer, Obaro, Stephen K, Dagan, Ron, Diawara, Idrissa, Skoczynska, Anna, Wang, Hui, Carter, Philip E, Klugman, Keith P, Rodgers, Gail, Breiman, Robert F, McGee, Lesley, Bentley, Stephen D, Munoz-Almagro, Carmen and Varon, Emmanuelle (2022) Emergence of a multidrug-resistant and virulent <i>Streptococcus pneumoniae</i> lineage mediates serotype replacement after PCV13: an international whole-genome sequencing study. LANCET MICROBE, 3 (10). E735-E743.

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Darboe, Saffiatou, Bradbury, Richard S, Phelan, Jody, Kanteh, Abdoulie, Muhammad, Abdul-Khalie, Worwui, Archibald, Yang, Shangxin, Nwakanma, Davis, Perez-Sepulveda, Blanca, Kariuki, Samuel et al (show 2 more authors) , Kwambana-Adams, Brenda and Antonio, Martin (2022) Genomic diversity and antimicrobial resistance among non- typhoidal<i> Salmonella</i> associated with human disease in The Gambia. MICROBIAL GENOMICS, 8 (3).

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Darboe, Saffiatou ORCID: 0000-0002-4711-3307, Bradbury, Richard ORCID: 0000-0002-5524-506X, Phelan, Jody ORCID: 0000-0001-8323-7019, Kanteh, Abdoulie, Muhammad, Abdul-Khalie, Worwui, Archibald, Yang, Shangxin ORCID: 0000-0001-9991-1178, Nwakanma, Davis ORCID: 0000-0002-6706-6069, Perez-Sepulveda, Blanca, Kariuki, Samuel et al (show 2 more authors) , Kwambana-Adams, Brenda and Antonio, Martin (2020) Genomic diversity and antimicrobial resistance among non-typhoidal <i>Salmonella</i> associated with human disease in The Gambia. Unknown.

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Lo, Stephanie W ORCID: 0000-0002-2182-0222, Gladstone, Rebecca A ORCID: 0000-0002-7993-3051, van Tonder, Andries J ORCID: 0000-0002-4380-5250, Hawkins, Paulina A, Kwambana-Adams, Brenda, Cornick, Jennifer E ORCID: 0000-0001-6841-9842, Madhi, Shabir A ORCID: 0000-0002-7629-0636, Nzenze, Susan A, du Plessis, Mignon ORCID: 0000-0001-9186-0679, Kandasamy, Rama et al (show 13 more authors) , Carter, Philip E, Eser, Özgen Köseoglu, Ho, Pak Leung ORCID: 0000-0002-8811-1308, Elmdaghri, Naima, Shakoor, Sadia, Clarke, Stuart C ORCID: 0000-0002-7009-1548, Antonio, Martin, Everett, Dean B ORCID: 0000-0002-8458-6779, von Gottberg, Anne, Klugman, Keith P, McGee, Lesley, Breiman, Robert F and Bentley, Stephen D (2018) Global Distribution of Invasive Serotype 35D Streptococcus pneumoniae Isolates following Introduction of 13-Valent Pneumococcal Conjugate Vaccine. Journal of clinical microbiology, 56 (7). e00228-e00218.

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Gladstone, Rebecca A, Lo, Stephanie W, Lees, John A, Croucher, Nicholas J, van Tonder, Andries J, Corander, Jukka, Page, Andrew J, Marttinen, Pekka, Bentley, Leon J, Ochoa, Theresa J et al (show 16 more authors) , Ho, Pak Leung, du Plessis, Mignon, Cornick, Jennifer E, Kwambana-Adams, Brenda, Benisty, Rachel, Nzenze, Susan A, Madhi, Shabir A, Hawkins, Paulina A, Everett, Dean B, Antonio, Martin, Dagan, Ron, Klugman, Keith P, von Gottberg, Anne, McGee, Lesley, Breiman, Robert F and Bentley, Stephen D (2019) International genomic definition of pneumococcal lineages, to contextualise disease, antibiotic resistance and vaccine impact. EBIOMEDICINE, 43. pp. 338-346.

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Kalizang'oma, Akuzike, Kwambana-Adams, Brenda, Chan, Jia Mun, Viswanath, Aishwarya, Gori, Andrea, Richard, Damien, Jolley, Keith A, Lees, John, Goldblatt, David, Beleza, Sandra et al (show 3 more authors) , Bentley, Stephen D, Heyderman, Robert S and Chaguza, Chrispin ORCID: 0000-0002-2108-1757 (2023) Novel Multilocus Sequence Typing and Global Sequence Clustering Schemes for Characterizing the Population Diversity of <i>Streptococcus mitis</i>. JOURNAL OF CLINICAL MICROBIOLOGY, 61 (1). e0080222-.

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Lo, Stephanie W, Gladstone, Rebecca A, van Tonder, Andries J, Lees, John A, du Plessis, Mignon, Benisty, Rachel, Givon-Lavi, Noga, Hawkins, Paulina A, Cornick, Jennifer E, Kwambana-Adams, Brenda et al (show 80 more authors) , Law, Pierra Y, Ho, Pak Leung, Antonio, Martin, Everett, Dean B, Dagan, Ron, von Gottberg, Anne, Klugman, Keith P, McGee, Lesley, Breiman, Robert F, Bentley, Stephen D, Brooks, Abdullah W, Corso, Alejandra, Davydov, Alexander, Maguire, Alison, Pollard, Andrew, Kiran, Anmol ORCID: 0000-0003-2680-2303, Skoczynska, Anna, Moiane, Benild, Beall, Bernard, Sigauque, Betuel, Aanensen, David, Lehmann, Deborah, Faccone, Diego, Faster-Nyarko, Ebenezer, Bojang, Ebrima, Egorova, Ekaterina, Voropaeva, Elena, Sampane-Donkor, Eric, Sadowy, Ewa, Bigogo, Godfrey, Mucavele, Helio, Belabbes, Houria, Diawara, Idrissa, Moisi, Jennifer, Verani, Jennifer, Keenan, Jeremy, Nair, Jyothish N, Bhai, Thulasee, Ndlangisa, Kedibone M, Zerouali, Khalid, Ravikumar, KL, Titov, Leonid, De Gouveia, Linda, Alaerts, Maaike, Ip, Margaret, Brandileone, Maria Cristina de Cunto, Hasanuzzaman, Md, Paragi, Metka, Nurse-Lucas, Michele, Ali, Mushal, Elmdaghri, Naima, Croucher, Nicholas, Wolter, Nicole, Porat, Nttrit, Eser, Ozgen Kaseoglu, Akpaka, Patrick E, Turner, Paul, Gagetti, Paula, Tientcheu, Peggy-Estelle, Carter, Philip E, Mostowy, Rafal, Kandasamy, Rarna, Ford, Rebecca, Henderson, Rebecca, Malaker, Roly, Shakoor, Sadia, Almeida, Samanta Cristine Grassi, Saha, Samir K, Doiphode, Sanjay, Madhi, Shabir A, Sekaran, Shamala Devi, Srifuengfung, Somporn, Obaro, Stephen, Clarke, Stuart C, Nzenze, Susan A, Kastrin, Tamara, Ochoa, Theresa J, Balaji, Veeraraghavan, Hryniewicz, Waleria and Urban, Yulia (2019) Pneumococcal lineages associated with serotype replacement and antibiotic resistance in childhood invasive pneumococcal disease in the post-PCV13 era: an international whole-genome sequencing study. LANCET INFECTIOUS DISEASES, 19 (7). pp. 759-769.

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van Tonder, Andries J, Gladstone, Rebecca A, Lo, Stephanie W, Nahm, Moon H, du Plessis, Mignon, Cornick, Jennifer, Kwambana-Adams, Brenda, Madhi, Shabir A, Hawkins, Paulina A, Benisty, Rachel et al (show 8 more authors) , Dagan, Ron, Everett, Dean, Antonio, Martin, Klugman, Keith P, von Gottbere, Anne, Breiman, Robert F, McGee, Lesley and Bentley, Stephen D (2019) Putative novel <i>cps</i> loci in a large global collection of pneumococci. MICROBIAL GENOMICS, 5 (7).

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Ndlangisa, Kedibone M, du Plessis, Mignon, Lo, Stephanie, de Gouveia, Linda, Chaguza, Chrispin ORCID: 0000-0002-2108-1757, Antonio, Martin, Kwambana-Adams, Brenda, Cornick, Jennifer, Everett, Dean B, Dagan, Ron et al (show 32 more authors) , Hawkins, Paulina A, Beall, Bernard, Corso, Alejandra, Almeida, Samanta Cristine Grassi, Ochoa, Theresa J, Obaro, Stephen, Shakoor, Sadia, Donkor, Eric S, Gladstone, Rebecca A, Ho, Pak Leung, Paragi, Metka, Doiphode, Sanjay, Srifuengfung, Somporn, Ford, Rebecca, Moisi, Jennifer, Saha, Samir K, Bigogo, Godfrey, Sigauque, Betuel, Eser, Ozgen Koseoglu, Elmdaghri, Naima, Titov, Leonid, Turner, Paul, Kumar, KL Ravi, Kandasamy, Rama, Egorova, Ekaterina, Ip, Margaret, Breiman, Robert F, Klugman, Keith P, McGee, Lesley, Bentley, Stephen D, von Gottberg, Anne and Con, Global Pneumococcal Sequencing (2022) A Streptococcus pneumoniae lineage usually associated with pneumococcal conjugate vaccine (PCV) serotypes is the most common cause of serotype 35B invasive disease in South Africa, following routine use of PCV. MICROBIAL GENOMICS, 8 (4).

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Gladstone, Rebecca A, Lo, Stephanie W, Goater, Richard, Yeats, Corin, Taylor, Ben, Hadfield, James, Lees, John A, Croucher, Nicholas J, van Tonder, Andries J, Bentley, Leon J et al (show 32 more authors) , Quah, Fu Xiang, Blaschke, Anne J, Pershing, Nicole L, Byington, Carrie L, Balaji, Veeraraghavan, Hryniewicz, Waleria, Sigauque, Betuel, Ravikumar, KL, Almeida, Samanta Cristine Grassi, Ochoa, Theresa J, Ho, Pak Leung, du Plessis, Mignon, Ndlangisa, Kedibone M, Cornick, Jennifer E, Kwambana-Adams, Brenda, Benisty, Rachel, Nzenze, Susan A, Madhi, Shabir A, Hawkins, Paulina A, Pollard, Andrew J, Everett, Dean B, Antonio, Martin, Dagan, Ron, Klugman, Keith P, von Gottberg, Anne, Metcalf, Benjamin J, Li, Yuan, Beall, Bernard W, McGee, Lesley, Breiman, Robert F, Aanensen, David M and Bentley, Stephen D (2020) Visualizing variation within Global Pneumococcal Sequence Clusters (GPSCs) and country population snapshots to contextualize pneumococcal isolates. MICROBIAL GENOMICS, 6 (5). pp. 1-13.

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Hawkins, Paulina A, Chochua, Sopio, Lo, Stephanie W, Belman, Sophie, Antonio, Martin, Kwambana-Adams, Brenda, von Gottberg, Anne, du Plessis, Mignon, Cornick, Jen, Beall, Bernard et al (show 3 more authors) , Breiman, Robert F, Bentley, Stephen D and McGee, Lesley (2023) A global genomic perspective on the multidrug- resistant<i> Streptococcus</i><i> pneumoniae</i> 15A-CC63 sub- lineage following pneumococcal conjugate vaccine introduction. MICROBIAL GENOMICS, 9 (4).

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Kalizang'oma, Akuzike, Chaguza, Chrispin ORCID: 0000-0002-2108-1757, Gori, Andrea, Davison, Charlotte, Beleza, Sandra, Antonio, Martin, Beall, Bernard, Goldblatt, David, Kwambana-Adams, Brenda, Bentley, Stephen D et al (show 1 more authors) and Heyderman, Robert S (2021) <i>Streptococcus pneumoniae</i> serotypes that frequently colonise the human nasopharynx are common recipients of penicillin-binding protein gene fragments from <i>Streptococcus mitis</i>. MICROBIAL GENOMICS, 7 (9).

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Lo, Stephanie W, Gladstone, Rebecca A, van Tonder, Andries J, Du Plessis, Mignon, Cornick, Jennifer E, Hawkins, Paulina A, Madhi, Shabir A, Nzenze, Susan A, Kandasamy, Rama, Ravikumar, KL et al (show 18 more authors) , Elmdaghri, Naima, Kwambana-Adams, Brenda, Grassi Almeida, Samanta Cristine, Skoczynska, Anna, Egorova, Ekaterina, Titov, Leonid, Saha, Samir K, Paragi, Metka, Everett, Dean B, Antonio, Martin, Klugman, Keith P, Li, Yuan, Metcalf, Benjamin J, Beall, Bernard, McGee, Lesley, Breiman, Robert F, Bentley, Stephen D and von Gottberg, Anne (2020) A mosaic tetracycline resistance gene <i>tet</i>(S/M) detected in an MDR pneumococcal CC230 lineage that underwent capsular switching in South Africa. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 75 (3). pp. 512-520.