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Lewis, Joseph M ORCID: 0000-0002-3837-5188, Feasey, Nicholas A and Rylance, Jamie (2019) Aetiology and outcomes of sepsis in adults in sub-Saharan Africa: a systematic review and meta-analysis. Critical Care (UK), 23 (1). 212-.

Bridgen, Jessica RE, Lewis, Joseph M ORCID: 0000-0002-3837-5188, Todd, Stacy, Taegtmeyer, Miriam, Read, Jonathan M and Jewell, Chris P (2024) A Bayesian approach to identifying the role of hospital structure and staff interactions in nosocomial transmission of SARS-CoV-2. Journal of the Royal Society Interface, 21 (212). p. 20230525.

Lewis, Joseph M ORCID: 0000-0002-3837-5188, Mphasa, Madalitso, Banda, Rachel, Beale, Mathew A, Heinz, Eva, Mallewa, Jane, Jewell, Christopher, Faragher, Brian, Thomson, Nicholas R and Feasey, Nicholas A (2022) Colonization dynamics of extended-spectrum beta-lactamase-producing Enterobacterales in the gut of Malawian adults. NATURE MICROBIOLOGY, 7 (10). 1593-+.

Lewis, Joseph M ORCID: 0000-0002-3837-5188, Volny-Anne, Alain, Waitt, Catriona ORCID: 0000-0003-0134-5855, Boffito, Marta and Khoo, Saye ORCID: 0000-0002-2769-0967 (2016) Dosing antiretroviral medication when crossing time zones: a review. AIDS, 30 (2). pp. 267-271.

Lewis, Joseph M ORCID: 0000-0002-3837-5188, Railton, Eimear, Riordan, Andrew, Khoo, Saye ORCID: 0000-0002-2769-0967 and Chaponda, Mas (2016) Early experience of dolutegravir pharmacokinetics in pregnancy: high maternal levels and significant foetal exposure with twice-daily dosing. AIDS, 30 (8). pp. 1313-1315.

Lewis, Joseph M ORCID: 0000-0002-3837-5188, Lester, Rebecca, Mphasa, Madalitso, Banda, Rachel, Edwards, Thomas, Thomson, Nicholas R and Feasey, Nicholas (2020) Emergence of carbapenemase-producing Enterobacteriaceae in Malawi. JOURNAL OF GLOBAL ANTIMICROBIAL RESISTANCE, 20. pp. 225-227.

Lewis, Joseph M ORCID: 0000-0002-3837-5188, Macpherson, Peter ORCID: 0000-0002-0329-9613, Adams, Emily R, Ochodo, Eleanor, Sands, Anita and Taegtmeyer, Miriam (2015) Field accuracy of fourth-generation rapid diagnostic tests for acute HIV-1: a systematic review. AIDS, 29 (18). pp. 2465-2471.

Lewis, Joseph M ORCID: 0000-0002-3837-5188, Hine, Paul, Walker, Jenny, Khoo, Sayeh H ORCID: 0000-0002-2769-0967, Taegtmeyer, Miriam, Squire, S Bertel and Sloan, Derek J (2016) First experience of effectiveness and safety of bedaquiline for 18 months within an optimised regimen for XDR-TB. EUROPEAN RESPIRATORY JOURNAL, 47 (5). pp. 1581-1584.

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Alhassan, Yussif, Otiso, Lilian, Okoth, Linet, Murray, Lois, Hemingway, Charlotte, Lewis, Joseph M ORCID: 0000-0002-3837-5188, Oguche, Mandela, Doyle, Vicki, Muturi, Nelly, Ogwang, Emily et al (show 2 more authors) , Barsosio, Hellen C and Taegtmeyer, Miriam (2024) Four antenatal care visits by four months of pregnancy and four vital tests for pregnant mothers: impact of a community-facility health systems strengthening intervention in Migori County, Kenya. BMC pregnancy and childbirth, 24 (1). 224-.

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Lewis, Joseph M ORCID: 0000-0002-3837-5188, Mphasa, Madalitso, Banda, Rachel, Beale, Mathew A, Mallewa, Jane, Anscome, Catherine, Zuza, Allan, Roberts, Adam P, Heinz, Eva, Thomson, Nicholas R et al (show 1 more authors) and Feasey, Nicholas A (2023) Genomic analysis of extended-spectrum beta-lactamase (ESBL) producing <i>Escherichia coli</i> colonising adults in Blantyre, Malawi reveals previously undescribed diversity. Microbial genomics, 9 (6). mgen001035-.

Lewis, Joseph M ORCID: 0000-0002-3837-5188, Mphasa, Madalitso, Banda, Rachel, Beale, Mathew A, Mallewa, Jane, Heinz, Eva, Thomson, Nicholas R and Feasey, Nicholas A (2022) Genomic and antigenic diversity of colonizing<i> Klebsiella</i><i> pneumoniae</i> isolates mirrors that of invasive isolates in Blantyre, Malawi. MICROBIAL GENOMICS, 8 (3). 000778-.

Lewis, Joseph M ORCID: 0000-0002-3837-5188, Lester, Rebecca ORCID: 0000-0002-0259-9630, Garner, Paul ORCID: 0000-0002-0607-6941 and Feasey, Nicholas A ORCID: 0000-0003-4041-1405 (2020) Gut mucosal colonisation with extended-spectrum beta-lactamase producing Enterobacteriaceae in sub-Saharan Africa: a systematic review and meta-analysis. Wellcome Open Research, 4. p. 160.

Lewis, Joseph M ORCID: 0000-0002-3837-5188, Lester, Rebecca ORCID: 0000-0002-0259-9630, Garner, Paul ORCID: 0000-0002-0607-6941 and Feasey, Nicholas A ORCID: 0000-0003-4041-1405 (2019) Gut mucosal colonisation with extended-spectrum beta-lactamase producing Enterobacteriaceae in sub-Saharan Africa: a systematic review and meta-analysis. Wellcome open research, 4. 160-.

Lewis, Joseph M ORCID: 0000-0002-3837-5188, Savage, Richard S, Beeching, Nicholas J ORCID: 0000-0002-7019-8791, Beadsworth, Mike BJ, Feasey, Nicholas and Covington, James A (2017) Identifying volatile metabolite signatures for the diagnosis of bacterial respiratory tract infection using electronic nose technology: A pilot study. PLOS ONE, 12 (12). e0188879-.

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Cocker, Derek ORCID: 0000-0002-6670-2713, Chidziwisano, Kondwani, Mphasa, Madalitso, Mwapasa, Taonga, Lewis, Joseph M ORCID: 0000-0002-3837-5188, Rowlingson, Barry, Sammarro, Melodie, Bakali, Winnie, Salifu, Chifundo, Zuza, Allan et al (show 17 more authors) , Charles, Mary, Mandula, Tamandani, Maiden, Victor, Amos, Stevie, Jacob, Shevin T, Kajumbula, Henry, Mugisha, Lawrence, Musoke, David, Byrne, Rachel, Edwards, Thomas, Lester, Rebecca, Elviss, Nicola, Roberts, Adam P, Singer, Andrew C, Jewell, Christopher, Morse, Tracy and Feasey, Nicholas A (2023) Investigating One Health risks for human colonisation with extended spectrum β-lactamase-producing Escherichia coli and Klebsiella pneumoniae in Malawian households: a longitudinal cohort study. The Lancet. Microbe, 4 (7). S2666-5247(23)00062-9-S2666-5247(23)00062-9.

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Lewis, Joseph M ORCID: 0000-0002-3837-5188, Mphasa, Madlitso, Keyala, Lucy, Banda, Rachel, Smith, Emma L, Duggan, Jackie, Brooks, Tim, Catton, Matthew, Mallewa, Jane, Katha, Grace et al (show 5 more authors) , Gordon, Stephen B, Faragher, Brian, Gordon, Melita A ORCID: 0000-0002-0629-0884, Rylance, Jamie and Feasey, Nicholas A (2022) A Longitudinal, Observational Study of Etiology and Long-Term Outcomes of Sepsis in Malawi Revealing the Key Role of Disseminated Tuberculosis. CLINICAL INFECTIOUS DISEASES, 74 (10). pp. 1840-1849.

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Barr, David A ORCID: 0000-0002-2922-9381, Lewis, Joseph M ORCID: 0000-0002-3837-5188, Feasey, Nicholas, Schutz, Charlotte, Kerkhoff, Andrew D, Jacob, Shevin T, Andrews, Ben, Kelly, Paul, Lakhi, Shabir, Muchemwa, Levy et al (show 30 more authors) , Bacha, Helio A, Hadad, David J, Bedell, Richard, van Lettow, Monique, Zachariah, Rony, Crump, John A, Alland, David, Corbett, Elizabeth L, Gopinath, Krishnamoorthy, Singh, Sarman, Griesel, Rulan, Maartens, Gary, Mendelson, Marc, Ward, Amy, Parry, Christopher M ORCID: 0000-0001-7563-7282, Talbot, Elizabeth A, Munseri, Patricia, Dorman, Susan E, Martinson, Neil, Shah, Maunank, Cain, Kevin, Heilig, Charles M, Varma, Jay, von Gottberg, Anne, Sacks, Leonard, Wilson, Douglas, Squire, S Bertel, Lalloo, David G ORCID: 0000-0001-7680-2200, Davies, Geriant R ORCID: 0000-0002-3819-490X and Meintjes, Graeme (2020) Mycobacterium tuberculosis bloodstream infection prevalence, diagnosis, and mortality risk in seriously ill adults with HIV: a systematic review and meta-analysis of individual patient data. The Lancet Infectious Diseases, 20 (6). pp. 742-752.

Lewis, Joseph M ORCID: 0000-0002-3837-5188, Abouyannis, Michael, Katha, Grace, Nyirenda, Mulinda, Chatsika, Grace, Feasey, Nicholas A and Rylance, Jamie (2020) Population incidence and mortality of sepsis in an urban African setting 2013-2016. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 71 (10). pp. 2547-2552.

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Lewis, Joseph M ORCID: 0000-0002-3837-5188, Smith, Colette, Torkington, Adele, Davies, Craig, Ahmad, Shazaad, Tomkins, Andrew, Shaw, Jonathan, Kingston, Margaret, Muqbill, Ghadeer, Hay, Philip et al (show 8 more authors) , Mulka, Larissa, Williams, Deborah, Waters, Laura, Brima, Nataliya, Marshall, Neal, Johnson, Margaret, Chaponda, Mas and Nelson, Mark (2017) Real-world persistence with antiretroviral therapy for HIV in the United Kingdom: A multicentre retrospective cohort study. JOURNAL OF INFECTION, 74 (4). pp. 401-407.

Lewis, Joseph M ORCID: 0000-0002-3837-5188, Folb, Jonathan, Katra, Sanjay, Squire, S Bertel, Taegtmeyer, Miriam and Beeching, Nick J ORCID: 0000-0002-7019-8791 (2016) <i>Brucella melitensis</i> prosthetic joint infection in a traveller returning to the UK from Thailand: Case report and review of the literature. TRAVEL MEDICINE AND INFECTIOUS DISEASE, 14 (5). pp. 444-450.

Price, Vivien ORCID: 0000-0003-3573-5106, Ngwira, Lucky Gift, Lewis, Joseph M ORCID: 0000-0002-3837-5188, Baker, Kate S ORCID: 0000-0001-5850-1949, Peacock, Sharon J, Jauneikaite, Elita and Feasey, Nicholas (2023) A systematic review of economic evaluations of whole-genome sequencing for the surveillance of bacterial pathogens. Microbial genomics, 9 (2). mgen000947-.