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Maestri, Alice ORCID: 0000-0002-2176-8831, Pursey, Elizabeth, Chong, Charlotte, Pons, Benoit ORCID: 0000-0002-9137-1047, Gandon, Sylvain, Custodio, Rafael, Chisnall, Matthew, Grasso, Anita, Paterson, Steve ORCID: 0000-0002-1307-2981, Baker, Kate ORCID: 0000-0001-5850-1949 et al (show 3 more authors) , Houte, Stineke van, Chevallereau, Anne and Westra, Edze (2023) Bacterial defences interact synergistically by disrupting phage cooperation. [Preprint]

Harrison, Ellie, Wood, A Jamie, Dytham, Calvin, Pitchford, Jonathan W, Truman, Julie, Spiers, Andrew, Paterson, Steve ORCID: 0000-0002-1307-2981 and Brockhurst, Michael A (2015) Bacteriophages Limit the Existence Conditions for Conjugative Plasmids. MBIO, 6 (3). e00586-.

Daramola, Olukayode ORCID: 0000-0002-3634-4556 (2023) Bioinformatic analysis of Fasciola hepatica genome. Doctor of Philosophy thesis, University of Liverpool.

Cwiklinski, Krystyna ORCID: 0000-0001-5577-2735, Allen, Katherine, LaCourse, James, Williams, Diana ORCID: 0000-0001-8186-7236, Paterson, Steve ORCID: 0000-0002-1307-2981 and Hodgkinson, Jane ORCID: 0000-0001-9152-8481 (2015) Characterisation of a novel panel of polymorphic microsatellite loci for the liver fluke, Fasciola hepatica, using a next generation sequencing approach. Infection, Genetics and Evolution, 32. pp. 298-304.

Ford, Suzanne A, Williams, David, Paterson, Steve ORCID: 0000-0002-1307-2981 and King, Kayla C (2017) Co-evolutionary dynamics between a defensive microbe and a pathogen driven by fluctuating selection. MOLECULAR ECOLOGY, 26 (7). pp. 1778-1789.

Li, Yang Comparative genomics approaches to study species divergence in ageing. Master of Philosophy thesis, University of Liverpool.

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Child, Harry T, Airey, George, Maloney, Daniel M, Parker, Abby, Wild, Jonathan, McGinley, Suzie, Evens, Nicholas, Porter, Jonathan, Templeton, Kate, Paterson, Steve ORCID: 0000-0002-1307-2981 et al (show 4 more authors) , van Aerle, Ronny, Wade, Matthew J, Jeffries, Aaron R and Bassano, Irene (2023) Comparison of metagenomic and targeted methods for sequencing human pathogenic viruses from wastewater. mBio, 14 (6). e0146823-.

van Houte, Stineke, Padfield, Daniel, Gomez, Pedro, Lujan, Adela M, Brockhurst, Michael A, Paterson, Steve ORCID: 0000-0002-1307-2981 and Buckling, Angus (2021) Compost spatial heterogeneity promotes evolutionary diversification of a bacterium. JOURNAL OF EVOLUTIONARY BIOLOGY, 34 (2). pp. 246-255.

Harrison, Ellie, Hall, James PJ ORCID: 0000-0002-4896-4592, Paterson, Steve ORCID: 0000-0002-1307-2981, Spiers, Andrew J and Brockhurst, Michael A (2017) Conflicting selection alters the trajectory of molecular evolution in a tripartite bacteria-plasmid-phage interaction. MOLECULAR ECOLOGY, 26 (10). pp. 2757-2764.

Fenn, Jonathan, Taylor, Christopher, Goertz, Sarah, Wanelik, Klara MM, Paterson, Steve ORCID: 0000-0002-1307-2981, Begon, Mike ORCID: 0000-0003-1715-5327, Jackson, Joe and Bradley, Jan (2023) Discrete patterns of microbiome variability across timescales in a wild rodent population. BMC MICROBIOLOGY, 23 (1). 87-.

Williams, David, Evans, Benjamin, Haldenby, Sam, Walshaw, Martin J, Brockhurst, Michael A, Winstanley, Craig ORCID: 0000-0002-2662-8053 and Paterson, Steve ORCID: 0000-0002-1307-2981 (2015) Divergent, CoexistingPseudomonas aeruginosaLineages in Chronic Cystic Fibrosis Lung Infections. American Journal of Respiratory and Critical Care Medicine, 191 (7). pp. 775-785.

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Burgess, Stewart TG, Bartley, Kathryn, Nunn, Francesca, Wright, Harry W, Hughes, Margaret ORCID: 0000-0001-7251-6821, Gemmell, Matthew, Haldenby, Sam, Paterson, Steve ORCID: 0000-0002-1307-2981, Rombauts, Stephane, Tomley, Fiona M et al (show 8 more authors) , Blake, Damer P, Pritchard, James, Schicht, Sabine, Strube, Christina, Oines, Oivind, Van Leeuwen, Thomas, Van de Peer, Yves and Nisbet, Alasdair J (2018) Draft Genome Assembly of the Poultry Red Mite, <i>Dermanyssus gallinae</i>. MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 7 (18). e01221-e01218.

Wanelik, Klara M, Begon, Mike ORCID: 0000-0003-1715-5327, Bradley, Janette E, Friberg, Ida M, Taylor, Christopher H, Jackson, Joseph A and Paterson, Steve ORCID: 0000-0002-1307-2981 (2023) Early-life immune expression profiles predict later-life health and fitness in a wild rodent. MOLECULAR ECOLOGY, 32 (13). pp. 3471-3482.

Wanelik, Klara, Begon, Mike, Bradley, Janette ORCID: 0000-0003-3973-7977, Friberg, Ida, Jackson, Joseph, Taylor, Christopher and Paterson, Steve ORCID: 0000-0002-1307-2981 (2019) Effects of an IgE receptor polymorphism acting on immunity, susceptibility to infection and reproduction in a wild rodent. [Preprint]

Wanelik, Klara M, Begon, Mike ORCID: 0000-0003-1715-5327, Bradley, Janette E, Friberg, Ida M, Jackson, Joseph A, Taylor, Christopher H and Paterson, Steve ORCID: 0000-0002-1307-2981 (2023) Effects of an IgE receptor polymorphism acting on immunity, susceptibility to infection, and reproduction in a wild rodent. ELIFE, 12. e77666-.

Thomason, Anna G, Begon, Michael ORCID: 0000-0003-1715-5327, Bradley, Janette E, Paterson, Steve ORCID: 0000-0002-1307-2981 and Jackson, Joseph A (2017) Endemic Hantavirus in Field Voles, Northern England. EMERGING INFECTIOUS DISEASES, 23 (6). pp. 1033-1035.

Hall, James PJ ORCID: 0000-0002-4896-4592, Harrison, Ellie, Lilley, Andrew K, Paterson, Steve ORCID: 0000-0002-1307-2981, Spiers, Andrew J and Brockhurst, Michael A (2015) Environmentally co‐occurring mercury resistance plasmids are genetically and phenotypically diverse and confer variable context‐dependent fitness effects. Environmental Microbiology, 17 (12). pp. 5008-5022.

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Bassano, Irene, Ramachandran, Vinoy, Khalifa, Mohammad, Lilley, Chris, Brown, Mathew, van Aerle, Ronny, Denise, Hubert ORCID: 0000-0001-9862-5890, Rowe, William, George, Airey, Cairns, Edward et al (show 11 more authors) , Wierzbicki, Claudia ORCID: 0000-0001-7266-2597, Pickwell, Natalie, Wilson, Myles, Carlile, Matthew, Holmes, Nadine, Payne, Alexander, Loose, Matthew, Burke, Terry ORCID: 0000-0003-3848-1244, Paterson, Steve ORCID: 0000-0002-1307-2981, Wade, Matthew and Grimsley, Jasmine MS (2022) Evaluation of variant calling algorithms for wastewater-based epidemiology using mixed populations of SARS-CoV-2 variants in synthetic and wastewater samples. [Preprint]

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Bassano, Irene, Ramachandran, Vinoy K, Khalifa, Mohammad S, Lilley, Chris J, Brown, Mathew R, van Aerle, Ronny, Denise, Hubert, Rowe, William, George, Airey, Cairns, Edward et al (show 10 more authors) , Wierzbicki, Claudia ORCID: 0000-0001-7266-2597, Pickwell, Natalie D, Carlile, Matthew, Holmes, Nadine, Payne, Alexander, Loose, Matthew, Burke, Terry A, Paterson, Steve ORCID: 0000-0002-1307-2981, Wade, Matthew J and Grimsley, Jasmine MS (2023) Evaluation of variant calling algorithms for wastewater-based epidemiology using mixed populations of SARS-CoV-2 variants in synthetic and wastewater samples. Microbial Genomics, 9 (4). mgen000933-.

Padfield, Daniel, Vujakovic, Alex, Paterson, Steve ORCID: 0000-0002-1307-2981, Griffiths, Rob, Buckling, Angus and Hesse, Elze (2020) Evolution of diversity explains the impact of pre-adaptation of a focal species on the structure of a natural microbial community. ISME JOURNAL, 14 (11). pp. 2877-2889.

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Morphew, Russell M, Wilkinson, Toby J, Mackintosh, Neil, Jahndel, Veronika, Paterson, Steve ORCID: 0000-0002-1307-2981, McVeigh, Paul, Abidi, Syed M Abbas, Saifullah, Khalid, Raman, Muthusamy, Ravikumar, Gopalakrishnan et al (show 3 more authors) , LaCourse, James, Maule, Aaron and Brophy, Peter M (2016) Exploring and Expanding the Fatty-Acid-Binding Protein Superfamily in <i>Fasciola</i> Species. JOURNAL OF PROTEOME RESEARCH, 15 (9). pp. 3308-3321.

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Cwiklinski, Krystyna ORCID: 0000-0001-5577-2735, de la Torre-Escudero, Eduardo, Trelis, Maria, Bernal, Dolores, Dufresne, Philippe J, Brennan, Gerard P, O'Neill, Sandra, Tort, Jose, Paterson, Steve ORCID: 0000-0002-1307-2981, Marcilla, Antonio et al (show 2 more authors) , Dalton, John P and Robinson, Mark W (2015) The Extracellular Vesicles of the Helminth Pathogen, <i>Fasciola hepatica</i>: Biogenesis Pathways and Cargo Molecules Involved in Parasite Pathogenesis. MOLECULAR & CELLULAR PROTEOMICS, 14 (12). pp. 3258-3273.

Cwiklinski, Krystyna ORCID: 0000-0001-5577-2735, Dalton, John Pius, Dufresne, Philippe J, La Course, James, Williams, Diana ORCID: 0000-0001-8186-7236, Hodgkinson, Jane ORCID: 0000-0001-9152-8481 and Paterson, Steve ORCID: 0000-0002-1307-2981 (2015) The Fasciola hepatica genome: gene duplication and polymorphism reveals adaptation to the host environment and the capacity for rapid evolution. Genome Biology, 16 (1). 71-.

Arriero, Elena, Wanelik, Klara M, Birtles, Richard J, Bradley, Janette E, Jackson, Joseph A, Paterson, Steve ORCID: 0000-0002-1307-2981 and Begon, Mike ORCID: 0000-0003-1715-5327 (2017) From the animal house to the field: Are there consistent individual differences in immunological profile in wild populations of field voles (<i>Microtus agrestis</i>)? PLOS ONE, 12 (8). e0183450-.

Green, Jonathan, Holmes, Andrew, Davidson, Amanda, Paterson, Steve ORCID: 0000-0002-1307-2981, Stockley, Paula, Beynon, Robert ORCID: 0000-0003-0857-495X and Hurst, Jane ORCID: 0000-0002-3728-9624 (2015) The Genetic Basis of Kin Recognition in a Cooperatively Breeding Mammal. Current Biology, 25 (20). pp. 2631-2641.

Wilson, Ian W ORCID: 0000-0001-7303-164X, Weedall, Gareth D, Lorenzi, Hernan, Howcroft, Timothy, Hon, Chung-Chau, Deloger, Marc, Guillén, Nancy, Paterson, Steve ORCID: 0000-0002-1307-2981, Clark, C Graham and Hall, Neil (2019) Genetic diversity and gene family expansions in members of the genus Entamoeba. Genome biology and evolution, 11 (3). pp. 688-705.

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Lilley, Thomas M ORCID: 0000-0001-5864-4958, Wilson, Ian W ORCID: 0000-0001-7303-164X, Field, Kenneth A, Reeder, DeeAnn M, Vodzak, Megan E, Turner, Gregory G, Kurta, Allen, Blomberg, Anna S, Hoff, Samantha, Herzog, Carl J et al (show 2 more authors) , Sewall, Brent J and Paterson, Steve ORCID: 0000-0002-1307-2981 (2020) Genome-Wide Changes in Genetic Diversity in a Population of <i>Myotis lucifugus</i> Affected by White-Nose Syndrome. G3-GENES GENOMES GENETICS, 10 (6). pp. 2007-2020.

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Lilley, Thomas ORCID: 0000-0001-5864-4958, Wilson, Ian, Field, Kenneth, Reeder, DeeAnn ORCID: 0000-0001-8651-2012, Vodzak, Megan, Turner, Gregory, Kurta, Allen, Blomberg, Anna ORCID: 0000-0002-6754-4948, Hoff, Samantha, Herzog, Carl ORCID: 0000-0002-1307-2981 et al (show 2 more authors) , Sewall, Brent and Paterson, Steve ORCID: 0000-0002-1307-2981 (2019) Genome-wide changes in genetic diversity in a population of<i>Myotis lucifugus</i>affected by white-nose syndrome. [Preprint]

Brown, Richard P, Paterson, Steve ORCID: 0000-0002-1307-2981 and Risse, Judith (2016) Genomic Signatures of Historical Allopatry and Ecological Divergence in an Island Lizard. GENOME BIOLOGY AND EVOLUTION, 8 (11). pp. 3618-3626.

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Nickbakhsh, Sema, Hughes, Joseph, Christofidis, Nicolaos, Griffiths, Emily, Shaaban, Sharif, Enright, Jessica, Smollett, Katherine, Nomikou, Kyriaki, Palmalux, Natasha, Tong, Lily et al (show 645 more authors) , Carmichael, Stephen, Sreenu, Vattipally B, Orton, Richard, Goldstein, Emily J, Tomb, Rachael M, Robson, Samuel C, Connor, Thomas R, Loman, Nicholas J, Golubchik, Tanya, Nunez, Rocio T Martinez, Bonsall, David, Rambaut, Andrew, Snell, Luke B, Livett, Rich, Ludden, Catherine, Corden, Sally, Nastouli, Eleni, Nebbia, Gaia, Johnston, Ian, Lythgoe, Katrina, Torok, M Estee, Goodfellow, Ian G, Prieto, Jacqui A, Saeed, Kordo, Jackson, David K, Houlihan, Catherine, Frampton, Dan, Hamilton, William L, Witney, Adam A, Bucca, Giselda, Pope, Cassie F, Moore, Catherine, Thomson, Emma C, Harrison, Ewan M, Smith, Colin P, Rogan, Fiona, Beckwith, Shaun M, Murray, Abigail, Singleton, Dawn, Eastick, Kirstine, Sheridan, Liz A, Randell, Paul, Jackson, Leigh M, Ariani, Cristina V, Gonçalves, Sónia, Fairley, Derek J, Loose, Matthew W, Watkins, Joanne, Moses, Samuel, Nicholls, Sam, Bull, Matthew, Amato, Roberto, Smith, Darren L, Aanensen, David M, Barrett, Jeffrey C, Aggarwal, Dinesh, Shepherd, James G, Curran, Martin D, Parmar, Surendra, Parker, Matthew D, Williams, Catryn, Glaysher, Sharon, Underwood, Anthony P, Bashton, Matthew, Pacchiarini, Nicole, Loveson, Katie F, Byott, Matthew, Carabelli, Alessandro M, Templeton, Kate E, de Silva, Thushan I, Wang, Dennis, Langford, Cordelia F, Sillitoe, John, Gunson, Rory N, Cottrell, Simon, O’Grady, Justin, Kwiatkowski, Dominic, Lillie, Patrick J, Cortes, Nicholas, Moore, Nathan, Thomas, Claire, Burns, Phillipa J, Mahungu, Tabitha W, Liggett, Steven, Beckett, Angela H, Holden, Matthew TG, Levett, Lisa J, Osman, Husam, Hassan-Ibrahim, Mohammed O, Simpson, David A, Chand, Mrera, Gupta, Ravi K, Darby, Alistair C ORCID: 0000-0002-3786-6209, Paterson, Steve ORCID: 0000-0002-1307-2981, Pybus, Oliver G, Volz, Erik M, de Angelis, Daniela, Robertson, David L, Page, Andrew J, Martincorena, Inigo, Aigrain, Louise, Bassett, Andrew R, Wong, Nick, Taha, Yusri, Erkiert, Michelle J, Chapman, Michael H Spencer, Dewar, Rebecca, McHugh, Martin P, Mookerjee, Siddharth, Aplin, Stephen, Harvey, Matthew, Sass, Thea, Umpleby, Helen, Wheeler, Helen, McKenna, James P, Warne, Ben, Taylor, Joshua F, Chaudhry, Yasmin, Izuagbe, Rhys, Jahun, Aminu S, Young, Gregory R, McMurray, Claire, McCann, Clare M, Nelson, Andrew, Elliott, Scott, Lowe, Hannah, Price, Anna, Crown, Matthew R, Rey, Sara, Roy, Sunando, Temperton, Ben, Shaaban, Sharif, Hesketh, Andrew R, Laing, Kenneth G, Monahan, Irene M, Heaney, Judith, Pelosi, Emanuela, Silviera, Siona, Wilson-Davies, Eleri, Fryer, Helen, Adams, Helen, du Plessis, Louis, Johnson, Rob, Harvey, William T, Hughes, Joseph, Orton, Richard J, Spurgin, Lewis G, Bourgeois, Yann, Ruis, Chris, O’Toole, Áine, Gourtovaia, Marina, Sanderson, Theo, Fraser, Christophe, Edgeworth, Jonathan, Breuer, Judith, Michell, Stephen L, Todd, John A, John, Michaela, Buck, David, Gajee, Kavitha, Kay, Gemma L, Peacock, Sharon J, Heyburn, David, Kitchman, Katie, McNally, Alan, Pritchard, David T, Dervisevic, Samir, Muir, Peter, Robinson, Esther, Vipond, Barry B, Ramadan, Newara A, Jeanes, Christopher, Weldon, Danni, Catalan, Jana, Jones, Neil, da Silva Filipe, Ana, Williams, Chris, Fuchs, Marc, Miskelly, Julia, Jeffries, Aaron R, Oliver, Karen, Park, Naomi R, Ash, Amy, Koshy, Cherian, Barrow, Magdalena, Buchan, Sarah L, Mantzouratou, Anna, Clark, Gemma, Holmes, Christopher W, Campbell, Sharon, Davis, Thomas, Tan, Ngee Keong, Brown, Julianne R, Harris, Kathryn A, Kidd, Stephen P, Grant, Paul R, Xu-McCrae, Li, Cox, Alison, Madona, Pinglawathee, Pond, Marcus, Randell, Paul A, Withell, Karen T, Williams, Cheryl, Graham, Clive, Denton-Smith, Rebecca, Swindells, Emma, Turnbull, Robyn, Sloan, Tim J, Bosworth, Andrew, Hutchings, Stephanie, Pymont, Hannah M, Casey, Anna, Ratcliffe, Liz, Jones, Christopher R, Knight, Bridget A, Haque, Tanzina, Hart, Jennifer, Irish-Tavares, Dianne, Witele, Eric, Mower, Craig, Watson, Louisa K, Collins, Jennifer, Eltringham, Gary, Crudgington, Dorian, Macklin, Ben, Iturriza-Gomara, Miren, Lucaci, Anita O, McClure, Patrick C, Carlile, Matthew, Holmes, Nadine, Moore, Christopher, Storey, Nathaniel, Rooke, Stefan, Yebra, Gonzalo, Craine, Noel, Perry, Malorie, Alikhan, Nabil-Fareed, Bridgett, Stephen, Cook, Kate F, Fearn, Christopher, Goudarzi, Salman, Lyons, Ronan A, Williams, Thomas, Haldenby, Sam T, Durham, Jillian, Leonard, Steven, Davies, Robert M, Batra, Rahul, Blane, Beth, Spyer, Moira J, Smith, Perminder, Yavus, Mehmet, Williams, Rachel J, Mahanama, Adhyana IK, Samaraweera, Buddhini, Girgis, Sophia T, Hansford, Samantha E, Green, Angie, Beaver, Charlotte, Bellis, Katherine L, Dorman, Matthew J, Kay, Sally, Prestwood, Liam, Rajatileka, Shavanthi, Quick, Joshua, Poplawski, Radoslaw, Reynolds, Nicola, Mack, Andrew, Morriss, Arthur, Whalley, Thomas, Patel, Bindi, Georgana, Iliana, Hosmillo, Myra, Pinckert, Malte L, Stockton, Joanne, Henderson, John H, Hollis, Amy, Stanley, William, Yew, Wen C, Myers, Richard, Thornton, Alicia, Adams, Alexander, Annett, Tara, Asad, Hibo, Birchley, Alec, Coombes, Jason, Evans, Johnathan M, Fina, Laia, Gatica-Wilcox, Bree, Gilbert, Lauren, Graham, Lee, Hey, Jessica, Hilvers, Ember, Jones, Sophie, Jones, Hannah, Kumziene-Summerhayes, Sara, McKerr, Caoimhe, Powell, Jessica, Pugh, Georgia, Taylor, Sarah, Trotter, Alexander J, Williams, Charlotte A, Kermack, Leanne M, Foulkes, Benjamin H, Gallis, Marta, Hornsby, Hailey R, Louka, Stavroula F, Pohare, Manoj, Wolverson, Paige, Zhang, Peijun, MacIntyre-Cockett, George, Trebes, Amy, Moll, Robin J, Ferguson, Lynne, Goldstein, Emily J, Maclean, Alasdair, Tomb, Rachael, Starinskij, Igor, Thomson, Laura, Southgate, Joel, Kraemer, Moritz UG, Raghwani, Jayna, Zarebski, Alex E, Boyd, Olivia, Geidelberg, Lily, Illingworth, Chris J, Jackson, Chris, Pascall, David, Vattipally, Sreenu, Freeman, Timothy M, Hsu, Sharon N, Lindsey, Benjamin B, James, Keith, Lewis, Kevin, Tonkin-Hill, Gerry, Tovar-Corona, Jaime M, Cox, MacGregor, Abudahab, Khalil, Menegazzo, Mirko, Taylor, Ben EW, Yeats, Corin A, Mukaddas, Afrida, Wright, Derek W, de Oliveira Martins, Leonardo, Colquhoun, Rachel, Hill, Verity, Jackson, Ben, McCrone, JT, Medd, Nathan, Scher, Emily, Keatley, Jon-Paul, Curran, Tanya, Morgan, Sian, Maxwell, Patrick, Smith, Ken, Eldirdiri, Sahar, Kenyon, Anita, Holmes, Alison H, Price, James R, Wyatt, Tim, Mather, Alison E, SkvortsovHartley, Timofey John A, Guest, Martyn, Kitchen, Christine, Merrick, Ian, Munn, Robert, Bertolusso, Beatrice, Lynch, Jessica, Vernet, Gabrielle, Kirk, Stuart, Wastnedge, Elizabeth, Stanley, Rachael, Idle, Giles, Bradley, Declan T, Poyner, Jennifer, Mori, Matilde, Jones, Owen, Wright, Victoria, Brooks, Ellena, Churcher, Carol M, Fragakis, Mireille, Galai, Katerina, Jermy, Andrew, Judges, Sarah, McManus, Georgina M, Smith, Kim S, Westwick, Elaine, Attwood, Stephen W, Bolt, Frances, Davies, Alisha, De Lacy, Elen, Downing, Fatima, Edwards, Sue, Meadows, Lizzie, Jeremiah, Sarah, Smith, Nikki, Foulser, Luke, Charalampous, Themoula, Patel, Amita, Berry, Louise, Boswell, Tim, Fleming, Vicki M, Howson-Wells, Hannah C, Joseph, Amelia, Khakh, Manjinder, Lister, Michelle M, Bird, Paul W, Fallon, Karlie, Helmer, Thomas, McMurray, Claire L, Odedra, Mina, Shaw, Jessica, Tang, Julian W, Willford, Nicholas J, Blakey, Victoria, Raviprakash, Veena, Sheriff, Nicola, Williams, Lesley-Anne, Feltwell, Theresa, Bedford, Luke, Cargill, James S, Hughes, Warwick, Moore, Jonathan, Stonehouse, Susanne, Atkinson, Laura, Lee, Jack CD, Shah, Divya, Alcolea-Medina, Adela, Ohemeng-Kumi, Natasha, Ramble, John, Sehmi, Jasveen, Williams, Rebecca, Chatterton, Wendy, Pusok, Monika, Everson, William, Castigador, Anibolina, Macnaughton, Emily, El Bouzidi, Kate, Lampejo, Temi, Sudhanva, Malur, Breen, Cassie, Sluga, Graciela, Ahmad, Shazaad SY, George, Ryan P, Machin, Nicholas W, Binns, Debbie, James, Victoria, Blacow, Rachel, Coupland, Lindsay, Smith, Louise, Barton, Edward, Padgett, Debra, Scott, Garren, Cross, Aidan, Mirfenderesky, Mariyam, Greenaway, Jane, Cole, Kevin, Clarke, Phillip, Duckworth, Nichola, Walsh, Sarah, Bicknell, Kelly, Impey, Robert, Wyllie, Sarah, Hopes, Richard, Bishop, Chloe, Chalker, Vicki, Harrison, Ian, Gifford, Laura, Molnar, Zoltan, Auckland, Cressida, Evans, Cariad, Johnson, Kate, Partridge, David G, Raza, Mohammad, Baker, Paul, Bonner, Stephen, Essex, Sarah, Murray, Leanne J, Lawton, Andrew I, Burton-Fanning, Shirelle, Payne, Brendan AI, Waugh, Sheila, Gomes, Andrea N, Kimuli, Maimuna, Murray, Darren R, Ashfield, Paula, Dobie, Donald, Ashford, Fiona, Best, Angus, Crawford, Liam, Cumley, Nicola, Mayhew, Megan, Megram, Oliver, Mirza, Jeremy, Moles-Garcia, Emma, Percival, Benita, Driscoll, Megan, Ensell, Leah, Lowe, Helen L, Maftei, Laurentiu, Mondani, Matteo, Chaloner, Nicola J, Cogger, Benjamin J, Easton, Lisa J, Huckson, Hannah, Lewis, Jonathan, Lowdon, Sarah, Malone, Cassandra S, Munemo, Florence, Mutingwende, Manasa, Nicodemi, Roberto, Podplomyk, Olga, Somassa, Thomas, Beggs, Andrew, Richter, Alex, Cormie, Claire, Dias, Joana, Forrest, Sally, Higginson, Ellen E, Maes, Mailis, Young, Jamie, Davidson, Rose K, Jackson, Kathryn A, Turtle, Lance, Keeley, Alexander J, Ball, Jonathan, Byaruhanga, Timothy, Chappell, Joseph G, Dey, Jayasree, Hill, Jack D, Park, Emily J, Fanaie, Arezou, Hilson, Rachel A, Yaze, Geraldine, Lo, Stephanie, Afifi, Safiah, Beer, Robert, Maksimovic, Joshua, McCluggage, Kathryn, Spellman, Karla, Bresner, Catherine, Fuller, William, Marchbank, Angela, Workman, Trudy, Shelest, Ekaterina, Debebe, Johnny, Sang, Fei, Zamudio, Marina Escalera, Francois, Sarah, Gutierrez, Bernardo, Vasylyeva, Tetyana I, Flaviani, Flavia, Ragonnet-Cronin, Manon, Smollett, Katherine L, Broos, Alice, Mair, Daniel, Nichols, Jenna, Nomikou, Kyriaki, Tong, Lily, Tsatsani, Ioulia, O’Brien, Sarah, Rushton, Steven, Sanderson, Roy, Perkins, Jon, Cotton, Seb, Gallagher, Abbie, Allara, Elias, Pearson, Clare, Bibby, David, Dabrera, Gavin, Ellaby, Nicholas, Gallagher, Eileen, Hubb, Jonathan, Lackenby, Angie, Lee, David, Manesis, Nikos, Mbisa, Tamyo, Platt, Steven, Twohig, Katherine A, Morgan, Mari, Aydin, Alp, Baker, David J, Foster-Nyarko, Ebenezer, Prosolek, Sophie J, Rudder, Steven, Baxter, Chris, Carvalho, Sílvia F, Lavin, Deborah, Mariappan, Arun, Radulescu, Clara, Singh, Aditi, Tang, Miao, Morcrette, Helen, Bayzid, Nadua, Cotic, Marius, Balcazar, Carlos E, Gallagher, Michael D, Maloney, Daniel, Stanton, Thomas D, Williamson, Kathleen A, Manley, Robin, Michelsen, Michelle L, Sambles, Christine M, Studholme, David J, Warwick-Dugdale, Joanna, Eccles, Richard, Gemmell, Matthew, Gregory, Richard, Hughes, Margaret ORCID: 0000-0001-7251-6821, Nelson, Charlotte, Rainbow, Lucille, Vamos, Edith E, Webster, Hermione J, Whitehead, Mark ORCID: 0000-0002-0452-1511, Wierzbicki, Claudia, Angyal, Adrienn, Green, Luke R, Whiteley, Max, Betteridge, Emma, Bronner, Iraad F, Farr, Ben W, Goodwin, Scott, Lensing, Stefanie V, McCarthy, Shane A, Quail, Michael A, Rajan, Diana, Redshaw, Nicholas M, Scott, Carol, Shirley, Lesley, Thurston, Scott AJ, Rowe, Will, Gaskin, Amy, Le-Viet, Thanh, Bonfield, James, Liddle, Jennifier, Whitwham, Andrew, Templeton, Kate, Gunson, Rory N, da Silva Filipe, Ana, Milosevic, Catriona, Thomson, Emma, Robertson, David L, Holden, Matthew TG, Illingworth, Christopher JR and Smith-Palmer, Alison (2022) Genomic epidemiology of SARS-CoV-2 in a university outbreak setting and implications for public health planning. Scientific Reports, 12 (1). 11735-.

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Vöhringer, Harald S, Sanderson, Theo, Sinnott, Matthew, De Maio, Nicola, Nguyen, Thuy, Goater, Richard, Schwach, Frank, Harrison, Ian, Hellewell, Joel, Ariani, Cristina V et al (show 923 more authors) , Gonçalves, Sonia, Jackson, David K, Johnston, Ian, Jung, Alexander W, Saint, Callum, Sillitoe, John, Suciu, Maria, Goldman, Nick, Panovska-Griffiths, Jasmina, Abnizova, Irina, Aigrain, Louise, Alderton, Alex, Ali, Mozam, Allen, Laura, Amato, Roberto, Anderson, Ralph, Ariani, Cristina, Austin-Guest, Siobhan, Bala, Sendu, Barrett, Jeffrey, Bassett, Andrew, Battleday, Kristina, Beal, James, Beale, Mathew, Beaver, Charlotte, Bellany, Sam, Bellerby, Tristram, Bellis, Katie, Berger, Duncan, Berriman, Matt, Betteridge, Emma, Bevan, Paul, Binley, Simon, Bishop, Jason, Blackburn, Kirsty, Bonfield, James, Boughton, Nick, Bowker, Sam, Brendler-Spaeth, Timothy, Bronner, Iraad, Brooklyn, Tanya, Buddenborg, Sarah Kay, Bush, Robert, Caetano, Catarina, Cagan, Alex, Carter, Nicola, Cartwright, Joanna, 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Turner, Andrew Immunogenetics and polymorphism in a natural population of field voles (Microtus agrestis). Doctor of Philosophy thesis, University of Liverpool.

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Hillary, Luke S, Farkas, Kata, Maher, Kathryn H, Lucaci, Anita, Thorpe, Jamie, Distaso, Marco A, Gaze, William H, Paterson, Steve ORCID: 0000-0002-1307-2981, Burke, Terry, Connor, Thomas R et al (show 3 more authors) , McDonald, James E, Malham, Shelagh K and Jones, David L (2021) Monitoring SARS-CoV-2 in municipal wastewater to evaluate the success of lockdown measures for controlling COVID-19 in the UK. WATER RESEARCH, 200. 117214-.

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Child, Harry T, O'Neill, Paul A, Moore, Karen, Rowe, William, Denise, Hubert, Bass, David, Wade, Matthew J, Loose, Matt, Paterson, Steve ORCID: 0000-0002-1307-2981, van Aerle, Ronny et al (show 1 more authors) and Jeffries, Aaron R (2023) Optimised protocol for monitoring SARS-CoV-2 in wastewater using reverse complement PCR-based whole-genome sequencing. PLOS ONE, 18 (4). e0284211-.

Harrison, Ellie, Guymer, David, Spiers, Andrew J, Paterson, Steve ORCID: 0000-0002-1307-2981 and Brockhurst, Michael A (2015) Parallel Compensatory Evolution Stabilizes Plasmids across the Parasitism-Mutualism Continuum. Current Biology, 25 (15). pp. 2034-2039.

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Taylor, Christopher H, Wanelik, Klara M, Friberg, Ida M, Lowe, Ann, Hall, Amy J, Ralli, Catriona, Birtles, Richard J, Begon, Mike ORCID: 0000-0003-1715-5327, Paterson, Steve ORCID: 0000-0002-1307-2981, Jackson, Joseph A et al (show 1 more authors) and Bradley, Janette E (2018) Physiological, but not fitness, effects of two interacting haemoparasitic infections in a wild rodent. INTERNATIONAL JOURNAL FOR PARASITOLOGY, 48 (6). pp. 463-471.

Harrison, Ellie, Truman, Julie, Wright, Rosanna, Spiers, Andrew J, Paterson, Steve ORCID: 0000-0002-1307-2981 and Brockhurst, Michael A (2015) Plasmid carriage can limit bacteria - phage coevolution. BIOLOGY LETTERS, 11 (8). 20150361-.

Hall, James ORCID: 0000-0002-4896-4592, Wright, Rosanna, Harrison, Ellie, Muddiman, Katie, Wood, Jamie, Paterson, Steve ORCID: 0000-0002-1307-2981 and Brockhurst, Michael (2021) Plasmid fitness costs are caused by specific genetic conflicts. [Preprint]

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Harney, Ewan, Paterson, Steve ORCID: 0000-0002-1307-2981, Collin, Helene, Chan, Brian HK, Bennett, Daimark and Plaistow, Stewart J ORCID: 0000-0002-9003-6271 (2022) Pollution induces epigenetic effects that are stably transmitted across multiple generations. EVOLUTION LETTERS, 6 (2). pp. 118-135.

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Lujan, Adela M, Paterson, Steve ORCID: 0000-0002-1307-2981, Hesse, Elze, Sommer, Lea M, Marvig, Rasmus L, Sharma, MD, Alseth, Ellinor O, Ciofu, Oana, Smania, Andrea M, Molin, Soren et al (show 2 more authors) , Johansen, Helle Krogh and Buckling, Angus (2022) Polymicrobial infections can select against <i>Pseudomonas aeruginosa</i> mutators because of quorum-sensing trade-offs. NATURE ECOLOGY & EVOLUTION, 6 (7). 979-+.

McVeigh, Paul, McCammick, Erin, McCusker, Paul, Wells, Duncan, Hodgkinson, Jane ORCID: 0000-0001-9152-8481, Paterson, Steve ORCID: 0000-0002-1307-2981, Mousley, Angela, Marks, Nikki J and Maule, Aaron G (2018) Profiling G protein-coupled receptors of <i>Fasciola hepatica</i> identifies orphan rhodopsins unique to phylum Platyhelminthes. INTERNATIONAL JOURNAL FOR PARASITOLOGY-DRUGS AND DRUG RESISTANCE, 8 (1). pp. 87-103.

Brunner, Franziska, Reynolds, Alan, Wilson, Ian, Price, Stephen, Paterson, Steve ORCID: 0000-0002-1307-2981, Atkinson, David ORCID: 0000-0002-1307-2981 and Plaistow, Stewart ORCID: 0000-0002-9003-6271 (2020) Quantifying multivariate genotype-by-environment interactions, evolutionary potential and its context-dependence in natural populations of the water flea,<i>Daphnia magna</i>. 2020.12.28.424558-.

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Gomez, Pedro, Hall, Alex R, Paterson, Steve ORCID: 0000-0002-1307-2981 and Buckling, Angus (2022) Rapid decline of adaptation of <i>Pseudomonas fluorescens</i> to soil biotic environment. BIOLOGY LETTERS, 18 (3). 20210593-.

Lilley, Thomas M ORCID: 0000-0001-5864-4958, Prokkola, Jenni M, Blomberg, Anna S, Paterson, Steve ORCID: 0000-0002-1307-2981, Johnson, Joseph S, Turner, Gregory G, Bartonicka, Tomas, Bachorec, Erik, Reeder, DeeAnn M and Field, Kenneth A (2019) Resistance is futile: RNA-sequencing reveals differing responses to bat fungal pathogen in Nearctic <i>Myotis lucifugus</i> and Palearctic <i>Myotis myotis</i>. OECOLOGIA, 191 (2). pp. 295-309.

Roberts, Katherine E, Meaden, Sean, Sharpe, Stephen, Kay, Suzanne, Doyle, Toby, Wilson, Drew, Bartlett, Lewis J, Paterson, Steve ORCID: 0000-0002-1307-2981 and Boots, Mike (2020) Resource quality determines the evolution of resistance and its genetic basis. MOLECULAR ECOLOGY, 29 (21). pp. 4128-4142.

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van Houte, Stineke, Padfield, Dan, Gomez, Pedro, Lujan, Adela, Brockhurst, Michael, Paterson, Steve ORCID: 0000-0002-1307-2981 and Buckling, Angus (2019) Spatial heterogeneity of an ecologically relevant environment accelerates diversification and adaptation. [Preprint]

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Huson, Kathryn M, Atcheson, Erwan, Oliver, Nicola AM, Best, Philip, Barley, Jason P, Hanna, Robert EB, McNeilly, Tom N, Fang, Yongxiang ORCID: 0000-0002-4514-5292, Haldenby, Sam, Paterson, Steve ORCID: 0000-0002-1307-2981 et al (show 1 more authors) and Robinson, Mark W (2021) Transcriptome and Secretome Analysis of Intra-Mammalian Life-Stages of Calicophoron daubneyi Reveals Adaptation to a Unique Host Environment. Molecular & cellular proteomics : MCP, 20. 100055-.

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Huson, Kathryn M, Atcheson, Erwan, Oliver, Nicola AM, Best, Philip, Barley, Jason P, Hanna, Robert EB, McNeilly, Tom N, Fang, Yongxiang, Haldenby, Sam, Paterson, Steve ORCID: 0000-0002-1307-2981 et al (show 1 more authors) and Robinson, Mark W (2021) Transcriptome and secretome analysis of intra-mammalian life-stages of the emerging helminth pathogen, Calicophoron daubneyi reveals adaptation to a unique host environment. Molecular & Cellular Proteomics, 20. mcp.RA120.002175-mcp.RA120.002175.

Wanelik, Klara M, Begon, Mike ORCID: 0000-0003-1715-5327, Arriero, Elena, Bradley, Janette E, Friberg, Ida M, Jackson, Joseph A, Taylor, Christopher H and Paterson, Steve ORCID: 0000-0002-1307-2981 (2020) Transcriptome-wide analysis reveals different categories of response to a standardised immune challenge in a wild rodent. Scientific Reports, 10 (1). 7444-.

Williams, David, Fothergill, Joanne L ORCID: 0000-0002-7012-1508, Evans, Benjamin, Caples, Jessica, Haldenby, Sam, Walshaw, Martin J, Brockhurst, Michael A, Winstanley, Craig ORCID: 0000-0002-2662-8053 and Paterson, Steve ORCID: 0000-0002-1307-2981 (2018) Transmission and lineage displacement drive rapid population genomic flux in cystic fibrosis airway infections of a Pseudomonas aeruginosa epidemic strain. MICROBIAL GENOMICS, 4 (3). e000167-.

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Moore, Matthew P, Lamont, Iain L, Williams, David, Paterson, Steve ORCID: 0000-0002-1307-2981, Kukavica-Ibrulj, Irena, Tucker, Nicholas P, Kenna, Dervla TD, Turton, Jane F, Jeukens, Julie, Freschi, Luca et al (show 10 more authors) , Wee, Bryan A, Loman, Nicholas J, Holden, Stephen, Manzoor, Susan, Hawkey, Peter, Southern, Kevin W ORCID: 0000-0001-6516-9083, Walshaw, Martin J, Levesque, Roger C, Fothergill, Joanne L ORCID: 0000-0002-7012-1508 and Winstanley, Craig ORCID: 0000-0002-2662-8053 (2021) Transmission, adaptation and geographical spread of the<i> Pseudomonas</i><i> aeruginosa</i> Liverpool epidemic strain. MICROBIAL GENOMICS, 7 (3). mgen000511-.

O'Brien, Siobhán ORCID: 0000-0003-2741-6172, Kümmerli, Rolf, Paterson, Steve ORCID: 0000-0002-1307-2981, Winstanley, Craig ORCID: 0000-0002-2662-8053 and Brockhurst, Michael A (2019) Transposable temperate phages promote the evolution of divergent social strategies in Pseudomonas aeruginosa populations. Proceedings. Biological sciences, 286 (1912). p. 20191794.

Raby, Cassandra ORCID: 0000-0001-7065-0306 (2020) Understanding drivers of parasite infections in baboons: insights across multiple levels, from populations to genetics. PhD thesis, University of Liverpool.

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Barnes, Kayla G ORCID: 0000-0002-8291-4388, Levy, Joshua I ORCID: 0000-0001-7573-7793, Gauld, Jillian, Rigby, Jonathan ORCID: 0000-0001-5143-0981, Kanjerwa, Oscar, Uzzell, Christopher B ORCID: 0000-0002-4204-3485, Chilupsya, Chisomo, Anscombe, Catherine, Tomkins-Tinch, Christopher ORCID: 0000-0002-9114-6421, Mbeti, Omar et al (show 16 more authors) , Cairns, Edward, Thole, Herbert, McSweeney, Shannon, Chibwana, Marah G ORCID: 0000-0002-8940-3855, Ashton, Philip M, Jere, Khuzwayo C ORCID: 0000-0003-3376-8529, Meschke, John Scott, Diggle, Peter, Cornick, Jennifer, Chilima, Benjamin, Jambo, Kondwani, Andersen, Kristian G ORCID: 0000-0001-6431-5982, Kawalazira, Gift, Paterson, Steve ORCID: 0000-0002-1307-2981, Nyirenda, Tonney S and Feasey, Nicholas ORCID: 0000-0003-4041-1405 (2023) Utilizing river and wastewater as a SARS-CoV-2 surveillance tool in settings with limited formal sewage systems. Nature communications, 14 (1). 7883-.

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Barnes, Kayla ORCID: 0000-0002-8291-4388, Levy, Joshua, Andersen, Kristian ORCID: 0000-0001-6431-5982, Gauld, Jillian, Rigby, Jonathan, Kanjerwa, Oscar, Uzzell, Christopher ORCID: 0000-0002-4204-3485, Chilupsya, Chisomo, Anscombe, Catherine, Tomkins-Tinch, Christopher ORCID: 0000-0002-9114-6421 et al (show 16 more authors) , Mbeti, Omar, Cairns, Edward, Thole, Herbert, McSweeney, Shannon, Chibwana, Marah, Ashton, Philip, Jere, Khuzwayo ORCID: 0000-0003-3376-8529, Meschke, John, Diggle, Peter, Cornick, Jennifer, Jambo, Kondwani ORCID: 0000-0002-3195-2210, Kawalazira, Gift, Paterson, Steve ORCID: 0000-0002-1307-2981, Nyirenda, Tonney, Feasey, Nicholas ORCID: 0000-0003-4041-1405 and Chilima, Benjamin (2023) Utilizing river and wastewater as a SARS-CoV-2 surveillance tool to predict trends and identify variants of concern in settings with limited formal sewage systems. [Preprint]

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Laine, Veronika N, Savilammi, Tiina, Wahlberg, Niklas, Meramo, Katarina, Ossa, Gonzalo, Johnson, Joseph S, Blomberg, Anna S, Yeszhanov, Aidyn B, Yung, Veronica, Paterson, Steve ORCID: 0000-0002-1307-2981 et al (show 1 more authors) and Lilley, Thomas M (2023) Whole-genome Analysis Reveals Contrasting Relationships Among Nuclear and Mitochondrial Genomes Between Three Sympatric Bat Species. GENOME BIOLOGY AND EVOLUTION, 15 (1). evac175-.

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Kevill, Jessica L, Pellett, Cameron, Farkas, Kata, Brown, Mathew R, Bassano, Irene, Denise, Hubert, McDonald, James E, Malham, Shelagh K, Porter, Jonathan, Warren, Jonathan et al (show 4 more authors) , Evens, Nicholas P, Paterson, Steve ORCID: 0000-0002-1307-2981, Singer, Andrew C and Jones, Davey L (2022) A comparison of precipitation and filtration-based SARS-CoV-2 recovery methods and the influence of temperature, turbidity, and surfactant load in urban wastewater. SCIENCE OF THE TOTAL ENVIRONMENT, 808. 151916-.

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Fisher, Adam M, Airey, George, Liu, Yuchen, Gemmell, Matthew, Thomas, Jordan, Bentley, Eleanor G, Whitehead, Mark A ORCID: 0000-0002-0452-1511, Paxton, William A ORCID: 0000-0001-5200-0801, Pollakis, Georgios ORCID: 0000-0002-9659-5461, Paterson, Steve ORCID: 0000-0002-1307-2981 et al (show 1 more authors) and Viney, Mark (2023) The ecology of viruses in urban rodents with a focus on SARS-CoV-2. EMERGING MICROBES & INFECTIONS, 12 (1). 2217940-.

Broniewski, Jenny M, Meaden, Sean, Paterson, Steve ORCID: 0000-0002-1307-2981, Buckling, Angus and Westra, Edze R (2020) The effect of phage genetic diversity on bacterial resistance evolution. The ISME Journal: multidisciplinary journal of microbial ecology, 14 (3). pp. 828-836.

Roberts, Katherine, Meaden, Sean, Sharpe, Stephen, Kay, Suzanne, Doyle, Toby, Wilson, Drew, Bartlett, Lewis, Paterson, Steve ORCID: 0000-0002-1307-2981 and Boots, Mike (2019) The genomic basis of evolved virus resistance is dependent on environmental resources. [Preprint]

Beesley, Nicola J ORCID: 0000-0003-0557-1833, Cwiklinski, Krystyna ORCID: 0000-0001-5577-2735, Allen, Katherine, Hoyle, Rebecca C, Spithill, Terry W, La Course, E James, Williams, Diana JL ORCID: 0000-0001-8186-7236, Paterson, Steve ORCID: 0000-0002-1307-2981 and Hodgkinson, Jane E ORCID: 0000-0001-9152-8481 (2023) A major locus confers triclabendazole resistance in Fasciola hepatica and shows dominant inheritance. PLOS Pathogens, 19 (1). e1011081-e1011081.