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Anderson, James ORCID: 0000-0003-0489-7997, Chokesuwattanaskul, Susama, Phelan, Marie, Welting, Tim, Lian, Lu Yun, Peffers, Mandy ORCID: 0000-0001-6979-0440 and Wright, HL ORCID: 0000-0003-0442-3134 (2018) 1H NMR metabolomics identifies underlying inflammatory pathology in osteoarthritis and rheumatoid arthritis synovial joints. Journal of Proteome Research, 17 (11). pp. 3780-3790.

Winstanley-Zarach, Phaedra, Rot, Gregor, Kuba, Shweta ORCID: 0000-0001-7564-4036, Smagul, Aibek, Peffers, Mandy ORCID: 0000-0001-6979-0440 and Tew, Simon ORCID: 0000-0002-1213-5418 (2022) Analysis of RNA polyadenylation in healthy and osteoarthritic human articular cartilage. [Preprint]

Peffers, Mandy ORCID: 0000-0001-6979-0440, McDermott, Ben ORCID: 0000-0002-6395-3963, Clegg, Peter ORCID: 0000-0003-0632-0032 and Riggs, Chris (2015) Comprehensive protein profiling of synovial fluid in osteoarthritis following protein equalization. Osteoarthritis and Cartilage, 23 (7). pp. 1204-1213.

Pye, Christine ORCID: 0000-0003-1761-8125, Clark, Natasha ORCID: 0009-0004-2101-7941, Bruniges, Natalie ORCID: 0000-0003-2561-3930, Peffers, Mandy ORCID: 0000-0001-6979-0440 and Comerford, Eithne ORCID: 0000-0002-5244-6042 (2023) Current evidence for non-pharmaceutical, non-surgical treatments of canine osteoarthritis. Journal of Small Animal Practice, 65 (1). pp. 3-23.

Peffers, Mandy Cyclical hyperosmolar loading of chondrocytes enhances extracellular matrix production and occurs as a consequence of p38 MAPK/ERK signalling amd increased mRNA half life. Master of Philosophy thesis, University of Liverpool.

Balaskas, Panagiotis (2021) Defining the role and mechanisms of miRNAs in cartilage ageing and disease. PhD thesis, University of Liverpool.

Pye, Christine (2021) Determining predictive metabolomic biomarkers of meniscal injury in dogs with cranial cruciate ligament disease using stifle joint synovial fluid. Master of Philosophy thesis, University of Liverpool.

Pye, Christine ORCID: 0000-0003-1761-8125, Green, daniel, Anderson, james ORCID: 0000-0003-0489-7997, Fitzgerald, Matthew, Phelan, marie, Comerford, Eithne ORCID: 0000-0002-5244-6042 and Peffers, Mandy ORCID: 0000-0001-6979-0440 (2023) Determining predictive metabolomic biomarkers of meniscal injury in dogs with cranial cruciate ligament rupture. Journal of Small Animal Practice, 65 (2). pp. 90-103.

Riasat, Kiran ORCID: 0000-0002-2512-8612, Bardell, David ORCID: 0000-0003-1573-1706, Goljanek-Whysall, Kasia ORCID: 0000-0001-8166-8800, Clegg, Peter and Peffers, Mandy ORCID: 0000-0001-6979-0440 (2020) Epigenetic mechanisms in tendon ageing. British Medical Bulletin, 135 (1). pp. 90-107.

Alkharabsheh, Sahem (2022) Epigenetic regulation of collagen synthesis. PhD thesis, University of Liverpool.

Clarke, Emily-Jayne (2023) Exploring the Role of Extracellular Vesicles in Equine Musculoskeletal Pathologies and Associated Regenerative Therapies. Doctor of Philosophy thesis, University of Liverpool.

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Shorter, Emily, Avelar, Roberto ORCID: 0000-0003-4997-9953, Zachariou, Margarita, Spyrou, George M, Raina, Priyanka, Smagul, Aibek, Ashraf Kharaz, Yalda ORCID: 0000-0003-4925-0206, Peffers, Mandy ORCID: 0000-0001-6979-0440, Goljanek-Whysall, Kasia ORCID: 0000-0001-8166-8800, de Magalhães, João Pedro ORCID: 0000-0002-6363-2465 et al (show 1 more authors) and Poulet, Blandine (2022) Identifying Novel Osteoarthritis-Associated Genes in Human Cartilage Using a Systematic Meta-Analysis and a Multi-Source Integrated Network. International Journal of Molecular Sciences, 23 (8). p. 4395.

Winstanley-Zarach, Phaedra, Rot, Gregor, Smagul, Aibek, Peffers, Mandy and Tew, Simon R ORCID: 0000-0002-1213-5418 (2023) Identifying alternative polyadenylation events associated with osteoarthritis. .

Peffers, Mandy ORCID: 0000-0001-6979-0440 (2020) Impaired chondrocyte U3 snoRNA expression in osteoarthritis impacts the chondrocyte protein translation apparatus. Scientific Reports, 10 (1). 13426-.

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Davidson, Rose, Gardner, Sarah, Jupp, Orla, Bullough, Angela, Butters, Sue, Watts, Laura, Donell, Simon, Traka, Maria, Saha, Shikha, Mithen, Richard et al (show 5 more authors) , Peffers, Mandy ORCID: 0000-0001-6979-0440, Clegg, Peter ORCID: 0000-0003-0632-0032, Bao, Yongping, Cassidy, Aedin and Clark, Ian (2017) Isothiocyanates are detected in human synovial fluid following broccoli consumption and can affect the tissues of the knee joint. Scientific Reports, 7 (1). 3398-.

Anderson, James ORCID: 0000-0003-0489-7997, Phelan, Marie, Caamaño-Gutiérrez, Eva, Clegg, Peter ORCID: 0000-0003-0632-0032, Rubio-Martinez, Luis and Peffers, Mandy ORCID: 0000-0001-6979-0440 (2020) Metabolomic and Proteomic Stratification of Equine Osteoarthritis. bioRxiv.

Balaskas, Panagiotis, Goljanek-Whysall, Katarzyna ORCID: 0000-0001-8166-8800, Clegg, Peter ORCID: 0000-0003-0632-0032, Fang, Yongxiang ORCID: 0000-0002-4514-5292, Cremers, Andy, Emans, Pieter, Welting, Tim and Peffers, Mandy ORCID: 0000-0001-6979-0440 (2017) MicroRNA Profiling in Cartilage Ageing. INTERNATIONAL JOURNAL OF GENOMICS, 2017. 2713725-.

Peffers, Mandy ORCID: 0000-0001-6979-0440, Jones, Andrew R ORCID: 0000-0001-6118-9327, McCabe, Antony ORCID: 0000-0003-3089-3674 and Anderson, James ORCID: 0000-0003-0489-7997 (2017) Neopeptide Analyser: A software tool for neopeptide discovery in proteomics data. Wellcome open research, 2. 24-.

Clarke, Emily, Lima, Cassio, Anderson, James ORCID: 0000-0003-0489-7997, Castanheira, Catarina, Beckett, Alison, James, Victoria ORCID: 0000-0002-9926-2953, Hyett, Jacob, Goodacre, Roy and Peffers, Mandy ORCID: 0000-0001-6979-0440 (2022) Optical photothermal infrared spectroscopy can differentiate equine osteoarthritic plasma extracellular vesicles from healthy controls. [Preprint]

Anderson, JR ORCID: 0000-0003-0489-7997 (2019) PROTEOMIC AND METABOLOMIC SIGNATURES OF ARTHROPATHIES. PhD thesis, University of Liverpool.

Peffers, Mandy Protein and transcriptome signatures of cartilage ageing and disease. Doctor of Philosophy thesis, University of Liverpool.

Clarke, Emily, Varela, Laura, Jenkins, Rosalind E, Lozano-Andrés, Estefanía, Cywińska, Anna, Przewozny, Maciej, van Weeren, P René, van de Lest, Chris HA ORCID: 0000-0003-2143-2825, Peffers, Mandy ORCID: 0000-0001-6979-0440 and Wauben, Marca HM ORCID: 0000-0003-0360-0311 (2024) Proteome and phospholipidome interrelationship of synovial fluid-derived extracellular vesicles in equine osteoarthritis: An exploratory 'multi-omics' study to identify composite biomarkers. Biochemistry and biophysics reports, 37. 101635-.

Peffers, Mandy ORCID: 0000-0001-6979-0440, Thorpe, Chavaunne, Collins, John, Eong, R, Wei, T, Screen, H and Clegg, Peter ORCID: 0000-0003-0632-0032 (2014) Proteomic Analysis Reveals Age-related Changes in Tendon Matrix Composition, with Age- and Injury-specific Matrix Fragmentation. The Journal of Biological Chemistry, 289 (37). pp. 25867-25878.

Kharaz, Yalda A, Tew, Simon R ORCID: 0000-0002-1213-5418, Peffers, Mandy ORCID: 0000-0001-6979-0440, Canty-Laird, Elizabeth G ORCID: 0000-0001-5041-1316 and Comerford, Eithne ORCID: 0000-0002-5244-6042 (2016) Proteomic differences between native and tissue-engineered tendon and ligament. PROTEOMICS, 16 (10). pp. 1547-1556.

Kharaz, Yalda, Fang, Yongxiang ORCID: 0000-0002-4514-5292, Welting, Tim, Peffers, Mandy ORCID: 0000-0001-6979-0440 and Comerford, Eithne ORCID: 0000-0002-5244-6042 (2020) Small RNA signatures of the anterior cruciate ligament from patients with knee joint osteoarthritis. MedRxiv.

Kharaz-Ashraf, Yalda, Zamboulis, Danae, Fang, Yongxiang, Welting, Tim, Peffers, Mandy ORCID: 0000-0001-6979-0440 and Comerford, Eithne ORCID: 0000-0002-5244-6042 (2023) Small RNA signatures of the anterior cruciate ligament from patients with knee joint osteoarthritis. Frontiers in Molecular Biosciences, 10. 1266088-.

Anderson, James ORCID: 0000-0003-0489-7997, Jacobsen, Stine, Walters, Marie, Bundgaard, Louise, Diendorfer, Andreas, Hackl, Matthias ORCID: 0000-0002-4136-7293, Clarke, Emily, James, Victoria ORCID: 0000-0002-9926-2953 and Peffers, Mandy ORCID: 0000-0001-6979-0440 (2022) Small non-coding RNA landscape of extracellular vesicles from a post-traumatic model of equine osteoarthritis. [Preprint]

Kanakis, Ioannis ORCID: 0000-0001-6410-1482, Alameddine, Moussira, Folkes, Leighton, Moxon, Simon ORCID: 0000-0003-4644-1816, Myrtziou, Ioanna, Ozanne, Susan, Peffers, Mandy ORCID: 0000-0001-6979-0440, Goljanek-Whysall, Katarzyna ORCID: 0000-0001-8166-8800 and Vasilaki, Aphrodite ORCID: 0000-0002-5652-0895 (2021) Small-RNA sequencing reveals altered skeletal muscle microRNAs and snoRNAs signatures in weanling male offspring from mouse dams fed a low protein diet during lactation.

Avelar, Roberto ORCID: 0000-0003-4997-9953 (2023) A Systems Biology Analysis of Cell Cycle Arrest Suggests that Modular Activation of Stress Responses Underlies Heterogeneous Cellular Senescence and Quiescence Phenotypes. PhD thesis, University of Liverpool.

Sutton, Elizabeth ORCID: 0000-0001-8028-7694 (2023) Tissue-specific bi-directional interactions between antioxidant transcription factor NRF2 and the circadian molecular clock: the effects of age, pharmacological drugs and environmental light disruption. PhD thesis, University of Liverpool.

Tew, Simon ORCID: 0000-0002-1213-5418, McDermott, Ben ORCID: 0000-0002-6395-3963, Fentem, RB ORCID: 0000-0001-5094-7831, Peffers, Mandy ORCID: 0000-0001-6979-0440 and Clegg, Peter ORCID: 0000-0003-0632-0032 (2014) Transcriptome‐Wide Analysis of Messenger RNA Decay in Normal and Osteoarthritic Human Articular Chondrocytes. Arthritis and Rheumatology, 66 (11). pp. 3052-3061.

Mcdermott, Benjamin ORCID: 0000-0002-6395-3963, Peffers, Mandy ORCID: 0000-0001-6979-0440, McDonagh, Brian ORCID: 0000-0003-2534-4427 and Tew, SR ORCID: 0000-0002-1213-5418 (2019) Translational regulation contributes to the secretory response of chondrocytic cells following exposure to Interleukin-1β. Journal of Biological Chemistry, 294 (35). pp. 13027-13029.

Morgan, RS (2019) Understanding the role of HACD enzymes and very long chain fatty acids in muscle development and disease. PhD thesis, University of Liverpool.

Anderson, James ORCID: 0000-0003-0489-7997, Phelan, Marie, Foddy, Laura, Clegg, Peter and Peffers, Mandy ORCID: 0000-0001-6979-0440 (2020) <i>Ex-Vivo</i>Equine Cartilage Explant Osteoarthritis Model - A Metabolomics and Proteomics Study. BioRxiv.

Bardell, David ORCID: 0000-0003-1573-1706 (2021) microRNA:target interactions in tendinopathy. PhD thesis, University of Liverpool.

Peffers, Mandy ORCID: 0000-0001-6979-0440 (2022) The role of extracellular vesicle miRNAs and tRNAs in synovial fibroblast senescence. Frontiers in Molecular Biosciences.

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Mennan, Claire, Hopkins, Timothy, Channon, Alastair, Elliott, Mark, Johnstone, Brian, Kadir, Timor, Loughlin, John, Peffers, Mandy ORCID: 0000-0001-6979-0440, Pitsillides, Andrew, Sofat, Nidhi et al (show 5 more authors) , Stewart, Caroline, Watt, Fiona E, Zeggini, Eleftheria, Holt, Cathy and Roberts, Sally (2020) The use of technology in the subcategorisation of osteoarthritis: a Delphi study approach. Osteoarthritis and Cartilage Open, 2 (3). p. 100081.