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Chaguza, Chrispin ORCID: 0000-0002-2108-1757, Yang, Marie, Cornick, Jennifer E, du Plessis, Mignon, Gladstone, Rebecca A, Kwambana-Adams, Brenda A, Lo, Stephanie W, Ebruke, Chinelo, Tonkin-Hill, Gerry, Peno, Chikondi et al (show 16 more authors) , Senghore, Madikay, Obaro, Stephen K, Ousmane, Sani, Pluschke, Gerd, Collard, Jean-Marc, Sigauque, Betuel, French, Neil ORCID: 0000-0003-4814-8293, Klugman, Keith P, Heyderman, Robert S, McGee, Lesley, Antonio, Martin, Breiman, Robert F, von Gottberg, Anne, Everett, Dean B, Kadioglu, Aras ORCID: 0000-0003-1137-6321 and Bentley, Stephen D (2020) Bacterial genome-wide association study of hyper-virulent pneumococcal serotype 1 identifies genetic variation associated with neurotropism. COMMUNICATIONS BIOLOGY, 3 (1). 559-.

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Chaguza, Chrispin ORCID: 0000-0002-2108-1757, Heinsbroek, Ellen, Gladstone, Rebecca, Tafatatha, Terence, Alaerts, Maaike, Peno, Chikondi, Cornick, Jennifer, Musicha, Patrick, Bar-Zeev, Naor ORCID: 0000-0003-0570-4624, Kamng’ona, Arox et al (show 8 more authors) , Kadioglu, Aras ORCID: 0000-0003-1137-6321, Mcgee, Lesley, Hanage, William, Breiman, Robert, Heyderman, Robert, French, Neil ORCID: 0000-0003-4814-8293, Everett, Dean and Bentley, Stephen (2020) Early Signals of Vaccine-driven Perturbation Seen in Pneumococcal Carriage Population Genomic Data. Clinical Infectious Diseases, 70 (7). 1294 - 1303.

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Chaguza, Chrispin ORCID: 0000-0002-2108-1757, Heinsbroek, Ellen, Gladstone, Rebecca, Tafatatha, Terence, Alaerts, Maaike, Peno, Chikondi, Cornick, Jennifer, Musicha, Patrick, Bar-Zeev, Naor ORCID: 0000-0003-0570-4624, Kamng’ona, Arox et al (show 8 more authors) , Kadioglu, Aras ORCID: 0000-0003-1137-6321, Mcgee, Lesley, Hanage, William, Breiman, Robert, Heyderman, Robert, French, Neil ORCID: 0000-0003-4814-8293, Everett, Dean and Bentley, Stephen (2020) Early Signals of Vaccine-driven Perturbation Seen in Pneumococcal Carriage Population Genomic Data. Clinical Infectious Diseases, 70 (7). pp. 1294-1303.

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Chaguza, Chrispin ORCID: 0000-0002-2108-1757, Heinsbroek, Ellen, Gladstone, Rebecca, Tafatatha, Terence, Alaerts, Maaike, Peno, Chikondi, Cornick, Jennifer, Musicha, Patrick, Bar-Zeev, Naor ORCID: 0000-0003-0570-4624, Kamng’ona, Arox et al (show 8 more authors) , Kadioglu, Aras ORCID: 0000-0003-1137-6321, Mcgee, Lesley, Hanage, William, Breiman, Robert, Heyderman, Robert, French, Neil ORCID: 0000-0003-4814-8293, Everett, Dean and Bentley, Stephen (2018) Early signals of vaccine driven perturbation seen in pneumococcal carriage population genomic data. BioRxiv. 459693-.

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Jere, Khuzwayo C ORCID: 0000-0003-3376-8529, Chaguza, Chrispin ORCID: 0000-0002-2108-1757, Bar-Zeev, Naor ORCID: 0000-0003-0570-4624, Lowe, Jenna, Peno, Chikondi, Kumwenda, Benjamin, Nakagomi, Osamu, Tate, Jacqueline E, Parashar, Umesh D, Heyderman, Robert S et al (show 3 more authors) , French, Neil ORCID: 0000-0003-4814-8293, Cunliffe, Nigel A ORCID: 0000-0002-5449-4988 and Miren, Iturriza-Gomara (2017) Emergence of Double- and Triple-Gene Reassortant G1P[8]Rotaviruses Possessing a DS-1-Like Backbone after RotavirusVaccine Introduction in Malawi. Journal of virology, 92 (3). e01246-e01217.

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Musicha, Patrick, Msefula, Chisomo L, Mather, Alison E, Chaguza, Chrispin ORCID: 0000-0002-2108-1757, Cain, Amy K, Peno, Chikondi, Kallonen, Teemu, Khonga, Margaret, Denis, Brigitte, Gray, Katherine J et al (show 4 more authors) , Heyderman, Robert S, Thomson, Nicholas R, Everett, Dean B and Feasey, Nicholas A (2019) Genomic analysis of <i>Klebsiella pneumoniae</i> isolates from Malawi reveals acquisition of multiple ESBL determinants across diverse lineages. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 74 (5). pp. 1223-1232.

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Cornick, Jennifer, Musicha, Patrick, Peno, Chikondi, Seager, Ezgi, Tam, Pui-Ying Iroh, Bilima, Sithembile, Bennett, Aisleen, Kennedy, Neil, Feasey, Nicholas, Heinz, Eva et al (show 1 more authors) and Cain, Amy K (2021) Genomic investigation of a suspected Klebsiella pneumoniae outbreak in a neonatal care unit in sub- Saharan Africa. MICROBIAL GENOMICS, 7 (11). 000703-.

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Musicha, Patrick, Feasey, Nicholas A, Cain, Amy K, Kallonen, Teemu, Chaguza, Chrispin ORCID: 0000-0002-2108-1757, Peno, Chikondi, Khonga, Margaret, Thompson, Sarah, Gray, Katherine J, Mather, Alison E et al (show 4 more authors) , Heyderman, Robert S, Everett, Dean B, Thomson, Nicholas R and Msefula, Chisomo L (2017) Genomic landscape of extended-spectrum β-lactamase resistance in <i>Escherichia coli</i> from an urban African setting. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 72 (6). pp. 1602-1609.

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Chaguza, Chrispin ORCID: 0000-0002-2108-1757, Cornick, Jennifer E, Andam, Cheryl P, Gladstone, Rebecca A, Alaerts, Maaike, Musicha, Patrick, Peno, Chikondi, Bar-Zeev, Naor ORCID: 0000-0003-0570-4624, Kamng'ona, Arox W ORCID: 0000-0002-0841-7586, Kiran, Anmol M ORCID: 0000-0003-2680-2303 et al (show 9 more authors) , Msefula, Chisomo L, McGee, Lesley, Breiman, Robert F, Kadioglu, Aras ORCID: 0000-0003-1137-6321, French, Neil ORCID: 0000-0003-4814-8293, Heyderman, Robert S, Hanage, William P, Bentley, Stephen D and Everett, Dean B (2017) Population genetic structure, antibiotic resistance, capsule switching and evolution of invasive pneumococci before conjugate vaccination in Malawi. VACCINE, 35 (35). pp. 4594-4602.

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Stenhouse, George E ORCID: 0000-0002-9681-9242, Jere, Khuzwayo C ORCID: 0000-0003-3376-8529, Peno, Chikondi, Bengtsson, Rebecca J, Chinyama, End, Mandolo, Jonathan, Cain, Amy, Iturriza-Gomara, Miren ORCID: 0000-0001-5816-6423, Bar-Zeev, Naor ORCID: 0000-0003-0570-4624, Cunliffe, Nigel A ORCID: 0000-0002-5449-4988 et al (show 2 more authors) , Cornick, Jennifer and Baker, Kate S ORCID: 0000-0001-5850-1949 (2021) Whole genome sequence analysis of<i> Shigella</i> from Malawi identifies fluoroquinolone resistance. MICROBIAL GENOMICS, 7 (5). 000532-.