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Number of items: 17.


Nicholls, Samuel M, Poplawski, Radoslaw, Bull, Matthew J, Underwood, Anthony, Chapman, Michael, Abu-Dahab, Khalil, Taylor, Ben, Colquhoun, Rachel M, Rowe, Will PM, Jackson, Ben
et al (show 13 more authors) (2021) CLIMB-COVID: continuous integration supporting decentralised sequencing for SARS-CoV-2 genomic surveillance. Genome Biology, 22 (1). 196-.


du Plessis, Louis ORCID: 0000-0003-0352-6289, McCrone, John T ORCID: 0000-0002-9846-8917, Zarebski, Alexander E ORCID: 0000-0003-1824-7653, Hill, Verity ORCID: 0000-0002-3509-8146, Ruis, Christopher ORCID: 0000-0003-0977-5534, Gutierrez, Bernardo ORCID: 0000-0002-9220-2739, Raghwani, Jayna ORCID: 0000-0001-8538-4995, Ashworth, Jordan ORCID: 0000-0003-1740-7475, Colquhoun, Rachel ORCID: 0000-0002-5577-9897, Connor, Thomas R ORCID: 0000-0003-2394-6504
et al (show 17 more authors) (2021) Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK. Science (New York, N.Y.), 371 (6530). pp. 708-712.


Volz, Erik, Hill, Verity, McCrone, John T, Price, Anna, Jorgensen, David, O'Toole, Áine, Southgate, Joel, Johnson, Robert, Jackson, Ben, Nascimento, Fabricia F
et al (show 22 more authors) (2021) Evaluating the Effects of SARS-CoV-2 Spike Mutation D614G on Transmissibility and Pathogenicity. Cell, 184 (1). 64-75.e11.


Jackson, Ben, Boni, Maciej F, Bull, Matthew J, Colleran, Amy, Colquhoun, Rachel M, Darby, Alistair C ORCID: 0000-0002-3786-6209, Haldenby, Sam, Hill, Verity, Lucaci, Anita, McCrone, John T
et al (show 14 more authors) (2021) Generation and transmission of interlineage recombinants in the SARS-CoV-2 pandemic. Cell, 184 (20). 5179-+.


Mullins, Alex, Murray, James AH, Bull, Matthew J, Jenner, Matthew, Jones, Cerith, Webster, Gordon, Green, Angharad ORCID: 0000-0002-8683-8191, Neill, DR ORCID: 0000-0002-7911-8153, Connor, Thomas R, Parkhill, Julian
et al (show 2 more authors) (2019) Genome mining identifies cepacin as a plant-protective metabolite of the biopesticidal bacterium Burkholderia ambifaria. Nature Microbiology, 4 (09). pp. 996-1005.


Nickbakhsh, Sema, Hughes, Joseph, Christofidis, Nicolaos, Griffiths, Emily, Shaaban, Sharif, Enright, Jessica, Smollett, Katherine, Nomikou, Kyriaki, Palmalux, Natasha, Tong, Lily
et al (show 645 more authors) (2022) Genomic epidemiology of SARS-CoV-2 in a university outbreak setting and implications for public health planning. Scientific Reports, 12 (1). 11735-.


Vöhringer, Harald S, Sanderson, Theo, Sinnott, Matthew, De Maio, Nicola, Nguyen, Thuy, Goater, Richard, Schwach, Frank, Harrison, Ian, Hellewell, Joel, Ariani, Cristina V
et al (show 923 more authors) (2021) Genomic reconstruction of the SARS-CoV-2 epidemic in England. Nature, 600 (7889). pp. 506-511.


Parfitt, Kasia M, Green, Angharad E ORCID: 0000-0002-8683-8191, Connor, Thomas R, Neill, Daniel R ORCID: 0000-0002-7911-8153 and Mahenthiralingam, Eshwar
(2023) Identification of two distinct phylogenomic lineages and model strains for the understudied cystic fibrosis lung pathogen <i>Burkholderia multivorans</i>. Microbiology (Reading, England), 169 (8). 001366-.


Hillary, Luke S, Farkas, Kata, Maher, Kathryn H, Lucaci, Anita, Thorpe, Jamie, Distaso, Marco A, Gaze, William H, Paterson, Steve ORCID: 0000-0002-1307-2981, Burke, Terry, Connor, Thomas R
et al (show 3 more authors) (2021) Monitoring SARS-CoV-2 in municipal wastewater to evaluate the success of lockdown measures for controlling COVID-19 in the UK. WATER RESEARCH, 200. 117214-.


Weiser, Rebecca, Green, Angharad E ORCID: 0000-0002-8683-8191, Bull, Matthew J, Cunningham-Oakes, Edward ORCID: 0000-0003-0260-5508, Jolley, Keith A, Maiden, Martin CJ, Hall, Amanda J, Winstanley, Craig ORCID: 0000-0002-2662-8053, Weightman, Andrew J, Donoghue, Denise
et al (show 3 more authors) (2019) Not all <i>Pseudomonas aeruginosa</i> are equal: strains from industrial sources possess uniquely large multireplicon genomes. MICROBIAL GENOMICS, 5 (7). e000276-.


Cunningham-Oakes, Edward ORCID: 0000-0003-0260-5508, Pointon, Tom, Murphy, Barry, Campbell-Lee, Stuart, Connor, Thomas R and Mahenthiralingam, Eshwar
(2022) Novel application of metagenomics for the strain-level detection of bacterial contaminants within non-sterile industrial products - a retrospective, real-time analysis. MICROBIAL GENOMICS, 8 (11). mgen000884-.


Langridge, Gemma C, Fookes, Maria, Connor, Thomas R, Feltwell, Theresa, Feasey, Nicholas, Parsons, Bryony N ORCID: 0000-0003-3599-1089, Seth-Smith, Helena MB, Barquist, Lars, Stedman, Anna, Humphrey, Tom
et al (show 9 more authors) (2015) Patterns of genome evolution that have accompanied host adaptation in Salmonella. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 112 (03). pp. 863-868.


Eales, Oliver, Page, Andrew J, de Oliveira Martins, Leonardo, Wang, Haowei, Bodinier, Barbara, Haw, David, Jonnerby, Jakob, Atchison, Christina, Robson, Samuel C, Connor, Thomas R
et al (show 638 more authors) (2022) SARS-CoV-2 lineage dynamics in England from September to November 2021: high diversity of Delta sub-lineages and increased transmissibility of AY.4.2. BMC Infectious Diseases, 22 (1). 647-.


Lythgoe, Katrina A ORCID: 0000-0002-7089-7680, Hall, Matthew ORCID: 0000-0002-2671-3864, Ferretti, Luca ORCID: 0000-0001-7578-7301, de Cesare, Mariateresa ORCID: 0000-0002-9847-1526, MacIntyre-Cockett, George, Trebes, Amy ORCID: 0000-0002-3715-9109, Andersson, Monique ORCID: 0000-0003-0619-1074, Otecko, Newton, Wise, Emma L ORCID: 0000-0002-0279-3900, Moore, Nathan ORCID: 0000-0002-4279-2443
et al (show 28 more authors) (2021) SARS-CoV-2 within-host diversity and transmission. Science (New York, N.Y.), 372 (6539). eabg0821-.


Baker, Kate S ORCID: 0000-0001-5850-1949, Dallman, Timothy J, Behar, Adi, Weill, Francois-Xavier, Gouali, Malika, Sobel, Jeremy, Fookes, Maria, Valinsky, Lea, Gal-Mor, Ohad, Connor, Thomas R
et al (show 6 more authors) (2016) Travel- and Community-Based Transmission of Multidrug-Resistant Shigella sonnei Lineage among International Orthodox Jewish Communities. EMERGING INFECTIOUS DISEASES, 22 (9). pp. 1545-1553.


Green, Angharad E ORCID: 0000-0002-8683-8191, Amezquita, Alejandro, Le Marc, Yvan, Bull, Matthew J, Connor, Thomas R and Mahenthiralingam, Eshwar
(2018) The consistent differential expression of genetic pathways following exposure of an industrial <i>Pseudomonas aeruginosa</i> strain to preservatives and a laundry detergent formulation. FEMS MICROBIOLOGY LETTERS, 365 (9). fny062-.


Wong, Vanessa K, Baker, Stephen ORCID: 0000-0003-1308-5755, Connor, Thomas R ORCID: 0000-0003-2394-6504, Pickard, Derek, Page, Andrew J, Dave, Jayshree, Murphy, Niamh, Holliman, Richard, Sefton, Armine, Millar, Michael
et al (show 4 more authors) (2016) An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid. Nature communications, 7 (1). 12827-.

This list was generated on Mon Apr 22 13:38:08 2024 BST.