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Moore, Shona ORCID: 0000-0001-8610-2806, Penrice-Randal, Rebekah ORCID: 0000-0002-0653-2097, Alruwaili, Muhannad, Dong, Xiaofeng, Pullan, Steven, Carter, Daniel, Bewley, Kevin ORCID: 0000-0002-9078-6734, Zhao, Qin, Sun, Yani, Hartley, Catherine et al (show 20 more authors) , Zhou, En-min, Solomon, Tom, Beadsworth, Michael, Cruise, James, Bogaert, Debby, Crook, Derrick ORCID: 0000-0002-0590-2850, Matthews, David ORCID: 0000-0003-4611-8795, Davidson, Andrew, Mahmood, Zana ORCID: 0000-0001-6000-6648, Aljabr, Waleed, Druce, Julian, Vipond, Richard, Ng, Lisa, Renia, Laurent, Openshaw, Peter, Baillie, Kenneth, Carroll, Miles, Semple, Malcolm ORCID: 0000-0001-9700-0418, Turtle, Lance and Hiscox, Julian (2020) Amplicon based MinION sequencing of SARS-CoV-2 and metagenomic characterisation of nasopharyngeal swabs from patients with COVID-19. medrxiv.

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Moore, Shona C ORCID: 0000-0001-8610-2806, Penrice-Randal, Rebekah ORCID: 0000-0002-0653-2097, Alruwaili, Muhannad, Randle, Nadine ORCID: 0000-0002-3775-9585, Armstrong, Stuart ORCID: 0000-0002-3862-1801, Hartley, Catherine, Haldenby, Sam, Dong, Xiaofeng, Alrezaihi, Abdulrahman, Almsaud, Mai et al (show 36 more authors) , Bentley, Eleanor, Clark, Jordan, Garcia-Dorival, Isabel ORCID: 0000-0002-5654-5662, Gilmore, Paul, Han, Ximeng, Jones, Benjamin, Luu, Lisa ORCID: 0000-0002-7748-5961, Sharma, Parul ORCID: 0000-0002-9090-7540, Shawli, Ghada, Sun, Yani, Zhao, Qin, Pullan, Steven T, Carter, Daniel P, Bewley, Kevin, Dunning, Jake, Zhou, En-min, Solomon, Tom ORCID: 0000-0001-7266-6547, Beadsworth, Michael, Cruise, James, Crook, Derrick W, Matthews, David A, Davidson, Andrew D, Mahmood, Zana ORCID: 0000-0001-6000-6648, Aljabr, Waleed ORCID: 0000-0002-9385-2776, Druce, Julian, Vipond, Richard, Ng, Lisa ORCID: 0000-0003-4071-5222, Renia, Laurent, Openshaw, Peter JM, Baillie, J Kenneth, Carroll, Miles W, Stewart, James ORCID: 0000-0002-8928-2037, Darby, Alistair ORCID: 0000-0002-3786-6209, Semple, Malcolm ORCID: 0000-0001-9700-0418, Turtle, Lance ORCID: 0000-0002-0778-1693 and Hiscox, Julian A ORCID: 0000-0002-6582-0275 (2020) Amplicon-Based Detection and Sequencing of SARS-CoV-2 in Nasopharyngeal Swabs from Patients With COVID-19 and Identification of Deletions in the Viral Genome That Encode Proteins Involved in Interferon Antagonism. VIRUSES-BASEL, 12 (10). E1164-.

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Kafetzopoulou, Liana E, Efthymiadis, Kyriakos, Lewandowski, Kuiama, Crook, Ant, Carter, Dan, Osborne, Jane, Aarons, Emma, Hewson, Roger, Hiscox, Julian A ORCID: 0000-0002-6582-0275, Carroll, Miles W et al (show 2 more authors) , Vipond, Richard and Pullan, Steven T (2018) Assessment of metagenomic Nanopore and Illumina sequencing for recovering whole genome sequences of chikungunya and dengue viruses directly from clinical samples. EUROSURVEILLANCE, 23 (50). pp. 18-30.

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Holding, Maya ORCID: 0000-0001-6666-5855, Dowall, Stuart D, Medlock, Jolyon M, Carter, Daniel P, McGinley, Liz, Curran-French, Mollie, Pullan, Steven T, Chamberlain, John, Hansford, Kayleigh M, Baylis, Matthew ORCID: 0000-0003-0335-187X et al (show 2 more authors) , Vipond, Richard and Hewson, Roger (2019) Detection of new endemic focus of tick-borne encephalitis virus (TBEV), Hampshire/Dorset border England, September 2019. EUROSURVEILLANCE, 24 (47). pp. 7-11.

Kafetzopoulou, Liana (2020) Metagenomic next generation sequencing for viral pathogens: Application and validation of a deployable sequencer for virus identification. PhD thesis, University of Liverpool.

Holding, Maya ORCID: 0000-0001-6666-5855, Dowall, Stuart D, Medlock, Jolyon M, Carter, Daniel P, Pullan, Steven T, Lewis, James, Vipond, Richard, Rocchi, Mara S, Baylis, Matthew ORCID: 0000-0003-0335-187X and Hewson, Roger (2020) Tick-Borne Encephalitis Virus, United Kingdom. EMERGING INFECTIOUS DISEASES, 26 (1). pp. 90-96.

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Townsend, Alain, Rijal, Pramila, Xiao, Julie, Tan, Tiong Kit, Huang, Kuan-Ying A, Schimanski, Lisa, Huo, Jiandong, Gupta, Nimesh, Rahikainen, Rolle, Matthews, Philippa C et al (show 53 more authors) , Crook, Derrick, Hoosdally, Sarah, Dunachie, Susanna, Barnes, Eleanor, Street, Teresa, Conlon, Christopher P, Frater, John, Arancibia-Carcamo, Carolina V, Rudkin, Justine, Stoesser, Nicole, Karpe, Fredrik, Neville, Matthew, Ploeg, Rutger, Oliveira, Marta, Roberts, David J, Lamikanra, Abigail A, Tsang, Hoi Pat, Bown, Abbie, Vipond, Richard, Mentzer, Alexander J, Knight, Julian C, Kwok, Andrew J, Screaton, Gavin R, Mongkolsapaya, Juthathip, Dejnirattisai, Wanwisa, Supasa, Piyada, Klenerman, Paul, Dold, Christina, Baillie, J Kenneth, Moore, Shona C ORCID: 0000-0001-8610-2806, Openshaw, Peter JM, Semple, Malcolm G ORCID: 0000-0001-9700-0418, Turtle, Lance CW ORCID: 0000-0002-0778-1693, Ainsworth, Mark, Allcock, Alice, Beer, Sally, Bibi, Sagida, Skelly, Donal, Stafford, Lizzy, Jeffrey, Katie, O'Donnell, Denise, Clutterbuck, Elizabeth, Espinosa, Alexis, Mendoza, Maria, Georgiou, Dominique, Lockett, Teresa, Martinez, Jose, Perez, Elena, Sanchez, Veronica Gallardo, Scozzafava, Giuseppe, Sobrinodiaz, Alberto, Thraves, Hannah and Joly, Etienne (2021) A haemagglutination test for rapid detection of antibodies to SARS-CoV-2. NATURE COMMUNICATIONS, 12 (1). 1951-.

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Townsend, Alain, Rijal, Pramila, Xiao, Julie, Tan, Tiong Kit, Huang, Kuan-Ying, Schimanski, Lisa, Huo, Jiandong, Gupta, Nimesh, Rahikainen, Rolle, Matthews, Philippa et al (show 44 more authors) , Crook, Derrick, Hoosdally, Sarah, Street, Teresa, Rudkin, Justine, Stoesser, Nicole, Karpe, Fredrik, Neville, Matthew, Ploeg, Rutger, Oliveira, Marta, Roberts, David, Lamikanra, Abigail, Tsang, Hoi, Bown, Abbie, Vipond, Richard, Mentzer, Alexander ORCID: 0000-0002-4502-2209, Knight, Julian, Kwok, Andrew, Screaton, Gavin, Mongkolsapaya, Juthathip, Dejnirattisai, Wanwisa, Supasa, Piyasa, Klenerman, Paul, Dold, Christina, Baillie, J, Moore, Shona ORCID: 0000-0001-8610-2806, Openshaw, Peter, Semple, Malcolm ORCID: 0000-0001-9700-0418, Turtle, Lance ORCID: 0000-0002-0778-1693, Ainsworth, Mark, Allcock, Alice, Beer, Sally, Bibi, Sagida ORCID: 0000-0002-0855-2737, Clutterbuck, Elizabeth, Espinosa, Alexis, Mendoza, Maria, Georgiou, Dominique, Lockett, Teresa, Martinez, Jose, Perez, Elena, Sanchez, Veronica, Scozzafava, Giuseppe, Sobrinodiaz, Alberto, Thraves, Hannah and Joly, Etienne (2020) A haemagglutination test for rapid detection of antibodies to SARS-CoV-2. In Review Nature Research.

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Townsend, Alain ORCID: 0000-0002-3702-0107, Rijal, Pramila ORCID: 0000-0002-9214-9851, Xiao, Julie, Tan, Tiong Kit ORCID: 0000-0001-8746-8308, Huang, Kuan-Ying, Schimanski, Lisa, Huo, Jiangdong, Gupta, Nimesh, Rahikainen, Rolle, Matthews, Philippa et al (show 44 more authors) , Crook, Derrick ORCID: 0000-0002-0590-2850, Hoosdally, Sarah, Street, Teresa, Rudkin, Justine, Stoesser, Nicole ORCID: 0000-0002-4508-7969, Karpe, Fredrik, Neville, Matthew, Ploeg, Rutger, Oliveira, Marta, Roberts, David, Lamikanra, Abigail, Tsang, Hoi Pat, Bown, Abbie, Vipond, Richard, Mentzer, Alexander ORCID: 0000-0002-4502-2209, Knight, Julian ORCID: 0000-0002-0377-5536, Kwok, Andrew, Screaton, Gavin, Mongkolsapaya, Juthathip, Dejnirattisai, Wanwisa, Supasa, Piyada, Klenerman, Paul ORCID: 0000-0003-4307-9161, Dold, Christina, Baillie, Kenneth, Moore, Shona, Openshaw, Peter JM, Semple, Malcolm ORCID: 0000-0001-9700-0418, Turtle, Lance CW, Ainsworth, Mark, Allcock, Alice, Beer, Sally, Bibi, Sagida ORCID: 0000-0002-0855-2737, Clutterbuck, Elizabeth, Espinosa, Alexis, Mendoza, Maria, Georgiou, Dominique, Lockett, Teresa, Martinez, Jose, Perez, Elena, Sanchez, Veronica, Scozzafava, Giuseppe, Sobrinodiaz, Alberto, Thraves, Hannah and Joly, Etienne ORCID: 0000-0002-7264-2681 (2020) A haemagglutination test for rapid detection of antibodies to SARS-CoV-2. medRxiv.