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Chatsirisupachai, Kasit ORCID: 0000-0001-9446-6714, Lagger, Cyril ORCID: 0000-0003-1701-6896 and de Magalhães, João Pedro (2022) Age-associated differences in the cancer molecular landscape. Trends in cancer, 8 (11). pp. 962-971.

Monaco, G (2017) Computational approaches to study the immune system using gene expression and flow cytometry data. PhD thesis, University of Liverpool.

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Zhang, Yuxin, Jiang, Jie, Ma, Jiongming, Wei, Zhen, Wang, Yue, Song, Bowen, Meng, Jia ORCID: 0000-0003-3455-205X, Jia, Guifang, de Magalhães, João Pedro ORCID: 0000-0002-6363-2465, Rigden, Daniel J ORCID: 0000-0002-7565-8937 et al (show 2 more authors) , Hang, Daiyun and Chen, Kunqi (2022) DirectRMDB: a database of post-transcriptional RNA modifications unveiled from direct RNA sequencing technology. Nucleic acids research, 51 (D1). gkac1061-gkac1061.

Wang, Jingwei (2019) Genetic Basis of Longevity and Age-Related Diseases: Evidence from Genetic Association Studies. PhD thesis, University of Liverpool.

Coenen, Frans ORCID: 0000-0003-1026-6649, Chen, Kunqi, Song, Bowen, Zhen, Wei, Huang, Daiyun, Su, Jionglong, de Magalhães, João Pedro, Rigden, Daniel and Meng, Jia (2022) Geographic encoding of transcripts enabled high-accuracy and isoform-aware deep learning of RNA methylation. Nucleic Acids Research.

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de Magalhães, João Pedro ORCID: 0000-0002-6363-2465, Abidi, Zoya, Dos Santos, Gabriel Arantes, Avelar, Roberto A, Barardo, Diogo, Chatsirisupachai, Kasit, Clark, Peter ORCID: 0000-0001-7440-9616, De-Souza, Evandro A, Johnson, Emily J, Lopes, Inês et al (show 5 more authors) , Novoa, Guy, Senez, Ludovic, Talay, Angelo, Thornton, Daniel and To, Paul Ka Po (2024) Human Ageing Genomic Resources: updates on key databases in ageing research. Nucleic acids research, 52 (D1). D900-D908.

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Shorter, Emily, Avelar, Roberto ORCID: 0000-0003-4997-9953, Zachariou, Margarita, Spyrou, George M, Raina, Priyanka, Smagul, Aibek, Ashraf Kharaz, Yalda ORCID: 0000-0003-4925-0206, Peffers, Mandy ORCID: 0000-0001-6979-0440, Goljanek-Whysall, Kasia ORCID: 0000-0001-8166-8800, de Magalhães, João Pedro ORCID: 0000-0002-6363-2465 et al (show 1 more authors) and Poulet, Blandine (2022) Identifying Novel Osteoarthritis-Associated Genes in Human Cartilage Using a Systematic Meta-Analysis and a Multi-Source Integrated Network. International Journal of Molecular Sciences, 23 (8). p. 4395.

Bunu, Gabriela, Toren, Dmitri, Ion, Catalin-Florentin, Barardo, Diogo, Sârghie, Larisa, Grigore, Laurentiu Gabriel, de Magalhães, João Pedro ORCID: 0000-0002-6363-2465, Fraifeld, Vadim E and Tacutu, Robi (2020) SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Scientific Data, 7 (1). 366-.

Dos Santos, Gabriel Arantes, Chatsirisupachai, Kasit, Avelar, Roberto A and de Magalhães, João Pedro ORCID: 0000-0002-6363-2465 (2023) Transcriptomic analysis reveals a tissue-specific loss of identity during ageing and cancer. BMC genomics, 24 (1). 644-.

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Cortese, Franco, Klokov, Dmitry, Osipov, Andreyan ORCID: 0000-0001-5921-9056, Stefaniak, Jakub ORCID: 0000-0001-9151-4485, Moskalev, Alexey ORCID: 0000-0002-3248-1633, Schastnaya, Jane, Cantor, Charles, Aliper, Alexander, Mamoshina, Polina, Ushakov, Igor et al (show 20 more authors) , Sapetsky, Alex, Vanhaelen, Quentin ORCID: 0000-0002-4611-2046, Alchinova, Irina, Karganov, Mikhail ORCID: 0000-0002-5862-8090, Kovalchuk, Olga, Wilkins, Ruth ORCID: 0000-0002-9621-477X, Shtemberg, Andrey, Moreels, Marjan, Baatout, Sarah ORCID: 0000-0001-8110-751X, Izumchenko, Evgeny, de Magalhães, João Pedro ORCID: 0000-0002-6363-2465, Artemov, Artem V ORCID: 0000-0002-0056-4549, Costes, Sylvain V ORCID: 0000-0002-8542-2389, Beheshti, Afshin ORCID: 0000-0003-4643-531X, Mao, Xiao Wen, Pecaut, Michael J ORCID: 0000-0002-2915-9686, Kaminskiy, Dmitry, Ozerov, Ivan V, Scheibye-Knudsen, Morten ORCID: 0000-0002-6637-1280 and Zhavoronkov, Alex (2018) Vive la radiorésistance!: converging research in radiobiology and biogerontology to enhance human radioresistance for deep space exploration and colonization. Oncotarget, 9 (18). pp. 14692-14722.

Chatsirisupachai, Kasit ORCID: 0000-0001-9446-6714, Lesluyes, Tom, Paraoan, Luminita ORCID: 0000-0001-7568-7116, Van Loo, Peter and de Magalhães, João Pedro ORCID: 0000-0002-6363-2465 (2021) An integrative analysis of the age-associated multi-omic landscape across cancers. Nature Communications, 12 (1). 2345-.

Ma, Jiongming, Song, Bowen, Wei, Zhen, Huang, Daiyun, Zhang, Yuxin, Su, Jionglong, de Magalhães, João Pedro ORCID: 0000-0002-6363-2465, Rigden, Daniel J ORCID: 0000-0002-7565-8937, Meng, Jia ORCID: 0000-0003-3455-205X and Chen, Kunqi (2022) m5C-Atlas: a comprehensive database for decoding and annotating the 5-methylcytosine (m5C) epitranscriptome. Nucleic acids research, 50 (D1). D196-D203.

Lagger, Cyril ORCID: 0000-0003-1701-6896, Ursu, Eugen ORCID: 0000-0003-0788-7831, Equey, Anaïs, Avelar, Roberto A, Pisco, Angela Oliveira ORCID: 0000-0003-0142-2355, Tacutu, Robi ORCID: 0000-0001-5853-2470 and de Magalhães, João Pedro ORCID: 0000-0002-6363-2465 (2023) scDiffCom: a tool for differential analysis of cell-cell interactions provides a mouse atlas of aging changes in intercellular communication. Nature aging, 3 (11). pp. 1446-1461.

Doherty, Aoife, Lopes, Inês, Ford, Christopher T, Monaco, Gianni, Guest, Patrick and de Magalhães, João Pedro ORCID: 0000-0002-6363-2465 (2020) A scan for genes associated with cancer mortality and longevity in pedigree dog breeds. Mammalian genome : official journal of the International Mammalian Genome Society, 31 (7-8). pp. 215-227.